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溶菌酶晶体中原子运动的相关性。

Correlations of atomic movements in lysozyme crystals.

作者信息

Clarage J B, Clarage M S, Phillips W C, Sweet R M, Caspar D L

机构信息

Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, Massachusetts 02254.

出版信息

Proteins. 1992 Feb;12(2):145-57. doi: 10.1002/prot.340120208.

Abstract

Diffuse scattering data have been collected on two crystal forms of lysozyme, tetragonal and triclinic, using synchrotron radiation. The observed diffraction patterns were simulated using an exact theory for simple model crystals which relates the diffuse scattering intensity distribution to the amplitudes and correlations of atomic movements. Although the mean square displacements in the tetragonal form are twice that in the triclinic crystal, the predominant component of atomic movement in both crystals is accounted for by short-range coupled motions where displacement correlations decay exponentially as a function of atomic separation, with a relaxation distance of approximately 6 A. Lattice coupled movements with a correlation distance approximately 50 A account for only about 5-10% of the total atomic mean square displacements in the protein crystals. The results contradict various presumptions that the disorder in protein crystals can be modeled predominantly by elastic vibrations or rigid body movements.

摘要

利用同步辐射收集了溶菌酶两种晶型(四方晶系和三斜晶系)的漫散射数据。使用简单模型晶体的精确理论对观察到的衍射图样进行了模拟,该理论将漫散射强度分布与原子运动的振幅和相关性联系起来。尽管四方晶型中的均方位移是三斜晶型中的两倍,但两种晶体中原子运动的主要成分是由短程耦合运动引起的,其中位移相关性随原子间距呈指数衰减,弛豫距离约为6埃。相关距离约为50埃的晶格耦合运动仅占蛋白质晶体中总原子均方位移的约5 - 10%。这些结果与各种假设相矛盾,即蛋白质晶体中的无序主要可以用弹性振动或刚体运动来建模。

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