Programa de Ingeniería Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
Departamento de Ciencias Biológicas, Facultad de Ciencias Exactas, Instituto de Biotecnología y Biología Molecular, CCT-La Plata-CONICET, Universidad Nacional de La Plata, La Plata, Argentina.
PLoS One. 2020 Aug 26;15(8):e0238218. doi: 10.1371/journal.pone.0238218. eCollection 2020.
One of the most studied mechanisms involved in bacterial evolution and diversification is conjugative transfer (CT) of plasmids. Plasmids able to transfer by CT often encode beneficial traits for bacterial survival under specific environmental conditions. Rhizobium etli CFN42 is a Gram-negative bacterium of agricultural relevance due to its symbiotic association with Phaseolus vulgaris through the formation of Nitrogen-fixing nodules. The genome of R. etli CFN42 consists of one chromosome and six large plasmids. Among these, pRet42a has been identified as a conjugative plasmid. The expression of the transfer genes is regulated by a quorum sensing (QS) system that includes a traI gene, which encodes an acyl-homoserine lactone (AHL) synthase and two transcriptional regulators (TraR and CinR). Recently, we have shown that pRet42a can perform CT on the root surface and inside nodules. The aim of this work was to determine the role of plant-related compounds in the CT of pRet42a. We found that bean root exudates or root and nodule extracts induce the CT of pRet42a in the plant rhizosphere. One possibility is that these compounds are used as nutrients, allowing the bacteria to increase their growth rate and reach the population density leading to the activation of the QS system in a shorter time. We tested if P. vulgaris compounds could substitute the bacterial AHL synthesized by TraI, to activate the conjugation machinery. The results showed that the transfer of pRet42a in the presence of the plant is dependent on the bacterial QS system, which cannot be substituted by plant compounds. Additionally, individual compounds of the plant exudates were evaluated; among these, some increased and others decreased the CT. With these results, we suggest that the plant could participate at different levels to modulate the CT, and that some compounds could be activating genes in the conjugation machinery.
质粒的接合转移(CT)是参与细菌进化和多样化的最受研究的机制之一。能够通过 CT 转移的质粒通常编码有利于细菌在特定环境条件下生存的有益特征。根瘤菌 etli CFN42 是一种革兰氏阴性细菌,由于它与菜豆通过形成固氮结瘤的共生关系而具有农业相关性。R. etli CFN42 的基因组由一个染色体和六个大质粒组成。其中,pRet42a 被鉴定为一种可接合的质粒。转移基因的表达受群体感应(QS)系统调控,该系统包括一个 traI 基因,该基因编码酰基高丝氨酸内酯(AHL)合酶和两个转录调节剂(TraR 和 CinR)。最近,我们已经表明 pRet42a 可以在根表面和根瘤内进行 CT。本工作的目的是确定植物相关化合物在 pRet42a CT 中的作用。我们发现,豆根分泌物或根和根瘤提取物在植物根际中诱导 pRet42a 的 CT。一种可能性是,这些化合物被用作营养物质,使细菌能够增加其生长速度并达到导致 QS 系统在更短时间内激活的种群密度。我们测试了菜豆化合物是否可以替代 TraI 合成的细菌 AHL,以激活接合机制。结果表明,在植物存在的情况下,pRet42a 的转移依赖于细菌的 QS 系统,而不能被植物化合物替代。此外,还评估了植物分泌物的个别化合物;其中一些增加了,而另一些则减少了 CT。有了这些结果,我们认为植物可以在不同层面参与调节 CT,并且一些化合物可能激活了接合机制中的基因。