Department of Dermatology and Venerology, Peking University First Hospital, Beijing, China.
Research Center for Medical Mycology, Peking University, Beijing, China.
Mycoses. 2020 Dec;63(12):1352-1361. doi: 10.1111/myc.13175. Epub 2020 Sep 17.
Matrix-assisted laser desorption ionisation-time-of-flight mass spectrometry (MALDI-TOF MS) is a novel technique for identifying dermatophytes. This study aimed to detect the limitation of MALDI-TOF MS applied to dermatophytes.
A total of 113 DNA-sequenced dermatophyte isolates preserved at the Research Center for Medical Mycology of Peking University were selected for this study. Forty-two isolates were selected as reference strains used to create a supplementary database. Seventy-one isolates (Trichophyton rubrum series, T benhamiae series, T mentagrophytes series species and T schoenleinii) were used to evaluate the suitability of the MALDI-TOF MS Biotyper system. MALDI Biotyper 4.0 software was employed to construct the main spectrum profile (MSP) dendrograms.
Correct identification rates at the species and genus levels were 90.1% and 91.5%, respectively, using Bruker Filamentous Fungi Library 1.0 combined with the novel database. The MSP dendrogram of the T rubrum series showed unambiguous separation of T rubrum and T violaceum and that of the T benhamiae series distinguished T verrucosum, T benhamiae and T erinacei. Conversely, the MSP dendrogram of the T mentagrophytes series did not successfully distinguish T mentagrophytes, T interdigitale and T tonsurans.
MALDI-TOF MS showed good performance in the identification and delineation of the T rubrum series and T benhamiae series, but showed poor performance in T mentagrophytes series.
基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)是一种新型的鉴定皮肤癣菌的技术。本研究旨在检测 MALDI-TOF MS 在鉴定皮肤癣菌方面的局限性。
选择北京大学生命科学学院医学真菌研究中心保存的 113 株经 DNA 测序的皮肤癣菌分离株进行本研究。选择 42 株分离株作为参考菌株,用于创建补充数据库。71 株分离株(红色毛癣菌系列、T benhamiae 系列、T mentagrophytes 系列种和 T schoenleinii)用于评估 MALDI-TOF MS Biotyper 系统的适用性。采用 MALDI Biotyper 4.0 软件构建主谱图(MSP)树状图。
使用 Bruker Filamentous Fungi Library 1.0 结合新数据库,在种和属水平上的正确鉴定率分别为 90.1%和 91.5%。红色毛癣菌系列的 MSP 树状图明确区分了红色毛癣菌和紫色毛癣菌,T benhamiae 系列的 MSP 树状图区分了 T verrucosum、T benhamiae 和 T erinacei。相反,T mentagrophytes 系列的 MSP 树状图未能成功区分 T mentagrophytes、T interdigitale 和 T tonsurans。
MALDI-TOF MS 在鉴定红色毛癣菌系列和 T benhamiae 系列方面表现良好,但在 T mentagrophytes 系列方面表现不佳。