从心脏植入式电子设备感染中分离出的、与滨海分枝杆菌最为相似的分枝杆菌属菌株NIID-NTM18的全基因组序列
Complete Genome Sequence of sp. Strain NIID-NTM18, Isolated from Cardiac Implantable Electronic Device Infection and Most Similar to Mycolicibacterium litorale.
作者信息
Fukano Hanako, Miyama Hiroshi, Takatsuki Seiji, Hirabayashi Aki, Suzuki Masato, Yoshida Mitsunori, Uwamino Yoshifumi, Hasegawa Naoki, Hoshino Yoshihiko
机构信息
Department of Mycobacteriology, Leprosy Research Center, National Institute of Infectious Diseases, Tokyo, Japan.
Department of Cardiology, Keio University School of Medicine, Tokyo, Japan.
出版信息
Microbiol Resour Announc. 2020 Sep 3;9(36):e00830-20. doi: 10.1128/MRA.00830-20.
Abstract
is a rapidly growing mycobacterial organism with unknown pathogenic features. Here, we report the complete genome sequence of sp. strain NIID-NTM18, which was isolated from a cardiac implantable electronic device infection and which is most similar to This sequence will provide essential information for future studies of the pathogenicity of these mycobacteria.
摘要
是一种快速生长的分枝杆菌，其致病特征未知。在此，我们报告了从心脏植入式电子设备感染中分离出的菌株NIID-NTM18的全基因组序列，该菌株与最为相似。该序列将为这些分枝杆菌致病性的未来研究提供重要信息。
相似文献
1
Complete Genome Sequence of sp. Strain NIID-NTM18, Isolated from Cardiac Implantable Electronic Device Infection and Most Similar to Mycolicibacterium litorale.从心脏植入式电子设备感染中分离出的、与滨海分枝杆菌最为相似的分枝杆菌属菌株NIID-NTM18的全基因组序列
Microbiol Resour Announc. 2020 Sep 3;9(36):e00830-20. doi: 10.1128/MRA.00830-20.
2
Infection of a Cardiac Implantable Electronic Device Caused by .由……引起的心脏植入式电子设备感染
JACC Case Rep. 2020 Jan 8;2(2):277-278. doi: 10.1016/j.jaccas.2019.10.037. eCollection 2020 Feb.
3
Genomic molecular signatures determined characterization of Mycolicibacterium gossypii sp. nov., a fast-growing mycobacterial species isolated from cotton field soil.从棉田土壤中分离得到的生长迅速的分枝杆菌属种，其基因组分子特征决定了其特性。
Antonie Van Leeuwenhoek. 2021 Oct;114(10):1735-1744. doi: 10.1007/s10482-021-01638-z. Epub 2021 Aug 15.
4
sp. nov., isolated from lead-zinc mine tailing, and reclassification of two species as comb. nov. and comb. nov.新种，从铅锌矿尾矿中分离得到，以及将两个物种重新分类为新组合1和新组合2 。 （注：这里原文中“comb. nov. and comb. nov.”未明确具体编号，所以翻译中保留原文表述形式并添加注释说明，实际应用中应根据具体编号准确翻译。）
Int J Syst Evol Microbiol. 2024 Jan;74(1). doi: 10.1099/ijsem.0.006221.
5
Draft Genome Sequence of Mycolicibacterium sp. Strain CH28, a Potential Degrader of Diisopropyl Ether, Isolated from Pharmaceutical Wastewater.从制药废水中分离得到的潜在二异丙醚降解菌分枝杆菌属菌株CH28的基因组序列草图
Microbiol Resour Announc. 2019 Sep 12;8(37):e00682-19. doi: 10.1128/MRA.00682-19.
6
sp. nov. and sp. nov., two new rapidly growing mycobacterial species.两种新的快速生长分枝杆菌种，sp. nov. 和 sp. nov.。
Int J Syst Evol Microbiol. 2021 Dec;71(12). doi: 10.1099/ijsem.0.005019.
7
sp. nov., a rapidly growing scotochromogenic strain isolated from .新种，从 中分离得到的一株快速生长的 scotochromogenic 菌株。
Int J Syst Evol Microbiol. 2019 Nov;69(11):3465-3471. doi: 10.1099/ijsem.0.003644.
8
Comparative Genomic Study of Vinyl Chloride Cluster and Description of Novel Species, sp. nov.氯乙烯菌群的比较基因组研究及新物种的描述，新种
Front Microbiol. 2021 Dec 22;12:767895. doi: 10.3389/fmicb.2021.767895. eCollection 2021.
9
Draft Genome Sequence of sp. Strain NCC-Tsukiji, Isolated from Blood Culture of a Patient with Malignant Lymphoma.从一名恶性淋巴瘤患者血培养物中分离出的sp.菌株NCC - 筑地的基因组序列草图
Microbiol Resour Announc. 2019 Apr 4;8(14):e01575-18. doi: 10.1128/MRA.01575-18.
10
Characterization of a novel nornicotine-degrading strain Mycolicibacterium sp. SMGY-1XX from a nornicotine-degrading consortium and preliminary elucidation of its biodegradation pathway by multi-omics analysis.从烟碱降解菌生物群落中筛选到一株新型烟碱降解菌——分枝杆菌属 SMGY-1XX，并通过组学分析初步阐明其生物降解途径。
J Hazard Mater. 2023 Sep 5;457:131777. doi: 10.1016/j.jhazmat.2023.131777. Epub 2023 Jun 3.
本文引用的文献
1
Infection of a Cardiac Implantable Electronic Device Caused by .由……引起的心脏植入式电子设备感染
JACC Case Rep. 2020 Jan 8;2(2):277-278. doi: 10.1016/j.jaccas.2019.10.037. eCollection 2020 Feb.
2
Draft Genome Sequence of sp. Strain NCC-Tsukiji, Isolated from Blood Culture of a Patient with Malignant Lymphoma.从一名恶性淋巴瘤患者血培养物中分离出的sp.菌株NCC - 筑地的基因组序列草图
Microbiol Resour Announc. 2019 Apr 4;8(14):e01575-18. doi: 10.1128/MRA.01575-18.
3
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.DFAST：一个灵活的原核生物基因组注释管道，用于更快地发布基因组。
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
4
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器：从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
5
Patient Report and Review of Rapidly Growing Mycobacterial Infection after Cardiac Device Implantation.心脏装置植入后快速生长分枝杆菌感染的病例报告及综述
Emerg Infect Dis. 2016 Mar;22(3):389-95. doi: 10.3201/eid2203.150584.
6
First report of Mycobacterium canariasense catheter-related bacteremia in the Americas.美洲地区卡纳里亚斯分枝杆菌导管相关菌血症的首例报告。
J Clin Microbiol. 2014 Jun;52(6):2265-9. doi: 10.1128/JCM.03103-13. Epub 2014 Apr 16.
7
Mycobacterium iranicum sp. nov., a rapidly growing scotochromogenic species isolated from clinical specimens on three different continents.伊朗分枝杆菌，一种快速生长的光产色种，从三大洲的临床标本中分离得到。
Int J Syst Evol Microbiol. 2013 Apr;63(Pt 4):1383-1389. doi: 10.1099/ijs.0.043562-0. Epub 2012 Jul 27.
8
Mycobacterium litorale sp. nov., a rapidly growing mycobacterium from soil.海分枝杆菌，一种来自土壤的快速生长分枝杆菌。
Int J Syst Evol Microbiol. 2012 May;62(Pt 5):1204-1207. doi: 10.1099/ijs.0.033449-0. Epub 2011 Jul 8.
9
Shifting the genomic gold standard for the prokaryotic species definition.动摇原核生物种定义的基因组黄金标准。
Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):19126-31. doi: 10.1073/pnas.0906412106. Epub 2009 Oct 23.
10
Surrounded by mycobacteria: nontuberculous mycobacteria in the human environment.被分枝杆菌环绕：人类环境中的非结核分枝杆菌。
J Appl Microbiol. 2009 Aug;107(2):356-67. doi: 10.1111/j.1365-2672.2009.04161.x. Epub 2009 Feb 18.
Zotero 插件