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对一种强效膜渗透性抑制剂:二苯并氧杂䓬衍生物的PES、分子结构、光谱学(傅里叶变换红外光谱、傅里叶变换拉曼光谱)、电子学(紫外可见光谱、最高占据分子轨道-最低未占据分子轨道)、量子化学及生物学(对接)研究

PES, molecular structure, spectroscopic (FT-IR, FT-Raman), electronic (UV-Vis, HOMO-LUMO), quantum chemical and biological (docking) studies on a potent membrane permeable inhibitor: dibenzoxepine derivative.

作者信息

Sevvanthi S, Muthu S, Raja M, Aayisha S, Janani S

机构信息

Department of Physics, Arignar Anna Govt. Arts College, Cheyyar, 604407, Tamilnadu, India.

Thiruvalluvar University, Serkkadu, Vellore, 632 115, Tamilnadu, India.

出版信息

Heliyon. 2020 Aug 17;6(8):e04724. doi: 10.1016/j.heliyon.2020.e04724. eCollection 2020 Aug.

DOI:10.1016/j.heliyon.2020.e04724
PMID:32885075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7452420/
Abstract

The dibenzoxepines derivatives have found a broad application in biological and pharmaceutical fields as new prospective drugs. So, the molecule (3aS,12bS)-5-Chlor-2-methyl-2,3,3a,12b-tetrahydro-1H-dibenzo[2,3:6,7]oxepino[4,5-c]pyrrol has been characterized by DFT (Density Functional Theory) approach to predict the important properties of it. The minimum energy conformer has been found by PES (Potential Energy Surface) and then the structure is optimized. Further, the structure is characterized spectroscopically by FT-IR and FT-Raman techniques to know the functional group and chemically active atoms. The geometrical parameters, PED (Potential Energy Distribution) assignments have also been reported. The electronic properties of the title compound have been explained by UV-Vis and HOMO-LUMO analyses that describe the charge transfer between the atoms of the molecule. Molecular Electrostatic Potential (MEP), Electron Localization Function (ELF) and Localized Orbital Locator (LOL) have been depicted to know the chemically active regions. The electrophilic and nucleophilic regions have been shown by Fukui functions. The Non-Linear Optics (NLO) for non-linear optical effects and the Natural Bond Orbital (NBO) for charge delocalization were studied. To study the biological activity of the title compound, molecular docking has been performed which suggests that the title molecule may act as a membrane permeable inhibitor.

摘要

二苯并氧杂卓衍生物作为新型潜在药物在生物和制药领域有广泛应用。因此,通过密度泛函理论(DFT)方法对分子(3aS,12bS)-5-氯-2-甲基-2,3,3a,12b-四氢-1H-二苯并[2,3:6,7]氧杂卓并[4,5-c]吡咯进行了表征,以预测其重要性质。通过势能面(PES)找到了最低能量构象体,然后对结构进行了优化。此外,通过傅里叶变换红外光谱(FT-IR)和傅里叶变换拉曼光谱(FT-Raman)技术对结构进行了光谱表征,以了解官能团和化学活性原子。还报道了几何参数、势能分布(PED)归属。通过紫外可见光谱(UV-Vis)和最高占据分子轨道-最低未占据分子轨道(HOMO-LUMO)分析解释了标题化合物的电子性质,这些分析描述了分子中原子间的电荷转移。绘制了分子静电势(MEP)、电子定域函数(ELF)和定域轨道定位器(LOL)以了解化学活性区域。通过福井函数显示了亲电和亲核区域。研究了用于非线性光学效应的非线性光学(NLO)和用于电荷离域的自然键轨道(NBO)。为了研究标题化合物的生物活性,进行了分子对接,结果表明标题分子可能作为一种膜通透性抑制剂起作用。

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