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心血管研究中的非编码RNA数据库

Non-Coding RNA Databases in Cardiovascular Research.

作者信息

Balamurali Deepak, Stoll Monika

机构信息

Genetic Epidemiology and Statistical Genetics, Department of Biochemistry, CARIM School for Cardiovascular Diseases, Maastricht University, 6229 ER Maastricht, The Netherlands.

Institute of Human Genetics, Genetic Epidemiology, University of Muenster, 48149 Muenster, Germany.

出版信息

Noncoding RNA. 2020 Sep 2;6(3):35. doi: 10.3390/ncrna6030035.

DOI:10.3390/ncrna6030035
PMID:32887511
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7549374/
Abstract

Cardiovascular diseases (CVDs) are of multifactorial origin and can be attributed to several genetic and environmental components. CVDs are the leading cause of mortality worldwide and they primarily damage the heart and the vascular system. Non-coding RNA (ncRNA) refers to functional RNA molecules, which have been transcribed into DNA but do not further get translated into proteins. Recent transcriptomic studies have identified the presence of thousands of ncRNA molecules across species. In humans, less than 2% of the total genome represents the protein-coding genes. While the role of many ncRNAs is yet to be ascertained, some long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) have been associated with disease progression, serving as useful diagnostic and prognostic biomarkers. A plethora of data repositories specialized in ncRNAs have been developed over the years using publicly available high-throughput data from next-generation sequencing and other approaches, that cover various facets of ncRNA research like basic and functional annotation, expressional profile, structural and molecular changes, and interaction with other biomolecules. Here, we provide a compendium of the current ncRNA databases relevant to cardiovascular research.

摘要

心血管疾病(CVDs)起源于多因素,可归因于多种遗传和环境因素。心血管疾病是全球范围内主要的死亡原因,主要损害心脏和血管系统。非编码RNA(ncRNA)是指功能性RNA分子,它们已转录为DNA,但不会进一步翻译成蛋白质。最近的转录组学研究已经在多个物种中鉴定出数千种ncRNA分子的存在。在人类中,整个基因组中不到2%代表蛋白质编码基因。虽然许多ncRNA的作用尚未确定,但一些长链非编码RNA(lncRNA)和微小RNA(miRNA)已与疾病进展相关,可作为有用的诊断和预后生物标志物。多年来,利用来自下一代测序和其他方法的公开可用高通量数据,已经开发了大量专门针对ncRNA的数据存储库,这些数据存储库涵盖了ncRNA研究的各个方面,如基础和功能注释、表达谱、结构和分子变化以及与其他生物分子的相互作用。在这里,我们提供了与心血管研究相关的当前ncRNA数据库的概要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a97/7549374/b3f936f78c3f/ncrna-06-00035-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a97/7549374/b054671707ac/ncrna-06-00035-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a97/7549374/b3f936f78c3f/ncrna-06-00035-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a97/7549374/b054671707ac/ncrna-06-00035-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a97/7549374/b3f936f78c3f/ncrna-06-00035-g002.jpg

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本文引用的文献

1
Overexpression of long non-coding RNA ANRIL promotes post-ischaemic angiogenesis and improves cardiac functions by targeting Akt.长链非编码 RNA ANRIL 的过表达通过靶向 Akt 促进缺血后血管生成并改善心脏功能。
J Cell Mol Med. 2020 Jun;24(12):6860-6868. doi: 10.1111/jcmm.15343. Epub 2020 May 13.
2
Unlocking the Value of White Blood Cells for Heart Failure Diagnosis.为心力衰竭诊断解锁白细胞的价值。
J Cardiovasc Transl Res. 2021 Feb;14(1):53-62. doi: 10.1007/s12265-020-10007-6. Epub 2020 May 4.
3
ncRPheno: a comprehensive database platform for identification and validation of disease related noncoding RNAs.
长链非编码RNA:非肿瘤性病理状况中的多功能关键因子。
Noncoding RNA Res. 2024 Jan 20;9(2):447-462. doi: 10.1016/j.ncrna.2024.01.011. eCollection 2024 Jun.
4
RNA-Chrom: a manually curated analytical database of RNA-chromatin interactome.RNA-Chrom:一个手动整理的 RNA-染色质互作分析数据库。
Database (Oxford). 2023 Apr 24;2023. doi: 10.1093/database/baad025.
5
Functional Role of microRNAs in Regulating Cardiomyocyte Death.microRNAs 在调控心肌细胞死亡中的功能作用。
Cells. 2022 Mar 12;11(6):983. doi: 10.3390/cells11060983.
6
LncRNA LINC00461 exacerbates myocardial ischemia-reperfusion injury via microRNA-185-3p/Myd88.长链非编码RNA LINC00461通过微小RNA-185-3p/髓样分化因子88加重心肌缺血再灌注损伤。
Mol Med. 2022 Mar 10;28(1):33. doi: 10.1186/s10020-022-00452-1.
7
Recent Major Transcriptomics and Epitranscriptomics Contributions toward Personalized and Precision Medicine.近期转录组学和表观转录组学对个性化和精准医学的重大贡献。
J Pers Med. 2022 Feb 1;12(2):199. doi: 10.3390/jpm12020199.
8
Editorial: Cell Communication in Vascular Biology.社论:血管生物学中的细胞通讯
Front Physiol. 2021 Mar 3;12:656959. doi: 10.3389/fphys.2021.656959. eCollection 2021.
9
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Bioengineered. 2021 Dec;12(1):875-885. doi: 10.1080/21655979.2021.1888596.
ncRPheno:一个全面的数据库平台,用于鉴定和验证与疾病相关的非编码 RNA。
RNA Biol. 2020 Jul;17(7):943-955. doi: 10.1080/15476286.2020.1737441. Epub 2020 Mar 26.
4
Preclinical development of a miR-132 inhibitor for heart failure treatment.用于心力衰竭治疗的 miR-132 抑制剂的临床前开发。
Nat Commun. 2020 Jan 31;11(1):633. doi: 10.1038/s41467-020-14349-2.
5
LncRNA-Mhrt regulates cardiac hypertrophy by modulating the miR-145a-5p/KLF4/myocardin axis.长链非编码 RNA-Mhrt 通过调节 miR-145a-5p/KLF4/myocardin 轴来调节心肌肥厚。
J Mol Cell Cardiol. 2020 Feb;139:47-61. doi: 10.1016/j.yjmcc.2019.12.013. Epub 2020 Jan 23.
6
Reappraising the role of inflammation in heart failure.重新评估炎症在心力衰竭中的作用。
Nat Rev Cardiol. 2020 May;17(5):269-285. doi: 10.1038/s41569-019-0315-x. Epub 2020 Jan 22.
7
Phenotype-genotype network construction and characterization: a case study of cardiovascular diseases and associated non-coding RNAs.表型-基因型网络的构建与特征描述:以心血管疾病及相关非编码 RNA 为例。
Database (Oxford). 2020 Jan 1;2020. doi: 10.1093/database/baz147.
8
RNAInter in 2020: RNA interactome repository with increased coverage and annotation.2020 年的 RNAInter:具有更高覆盖率和注释的 RNA 相互作用组库。
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Front Genet. 2019 Nov 12;10:1116. doi: 10.3389/fgene.2019.01116. eCollection 2019.