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优化核糖体结合位点序列以提高重组谷氨酸棒杆菌中的基因表达和 4-羟基异亮氨酸生物合成。

Optimization of ribosomal binding site sequences for gene expression and 4-hydroxyisoleucine biosynthesis in recombinant corynebacterium glutamicum.

机构信息

State Key Laboratory of Food Science and Technology, Jiangnan University, 1800 Lihu Avenue, Wuxi 214122, China.

State Key Laboratory of Food Science and Technology, Jiangnan University, 1800 Lihu Avenue, Wuxi 214122, China.

出版信息

Enzyme Microb Technol. 2020 Oct;140:109622. doi: 10.1016/j.enzmictec.2020.109622. Epub 2020 Jun 13.

Abstract

4-Hydroxyisoleucine (4-HIL) has potential value for treating diabetes. α-Ketoglutarate (α-KG)-dependent l-isoleucine dioxygenase (IDO) can convert l-isoleucine (Ile) into 4-HIL. In our previous study, 4-HIL was de novo synthesized from glucose by expressing the ido gene in Corynebacterium glutamicum strain SN01, an Ile producer, and neither Ile nor α-KG was added. In this study, ribosomal binding site (RBS) engineering was applied for gene expression and 4-HIL biosynthesis in C. glutamicum. The 18 tested RBS sequences showed greatly differing strengths for expressing ido, and 8.10-104.22 mM 4-HIL was produced. To supply the cosubstrate α-KG at different levels, the odhI gene was then expressed using the RBS sequences of high, medium, and low strength in the above mentioned optimal strain SF01 carrying R8-ido. However, 4-HIL production decreased to varying amounts, and in some strains, the α-KG was redirected into l-glutamate synthesis. Next, the O supply was further enhanced in three ido-odhI coexpressing strains by overexpressing the vgb gene, and 4-HIL production changed dramatically. 4-HIL (up to 119.27 ± 5.03 mM) was produced in the best strain, SF08, suggesting that the synchronic supply of cosubstrates α-KG and O is critical for the high-yield production of 4-HIL. Finally, the avtA gene and the ldhA-pyk2 cluster were deleted separately in SF08 to reduce pyruvate-derived byproducts, and 4-HIL production increased to 122.16 ± 5.18 and 139.82 ± 1.56 mM, respectively, indicating that both strains were promising candidates for producing 4-HIL. Therefore, fine-tuning ido expression and the cosubstrates supply through RBS engineering is a useful strategy for improving 4-HIL biosynthesis in C. glutamicum.

摘要

4-羟基异亮氨酸(4-HIL)在治疗糖尿病方面具有潜在价值。α-酮戊二酸(α-KG)依赖性 l-异亮氨酸双加氧酶(IDO)可以将 l-异亮氨酸(Ile)转化为 4-HIL。在我们之前的研究中,通过在产 l-异亮氨酸的谷氨酸棒杆菌菌株 SN01 中表达 ido 基因,从葡萄糖中从头合成 4-HIL,既不添加 Ile 也不添加 α-KG。在这项研究中,核糖体结合位点(RBS)工程被应用于谷氨酸棒杆菌的基因表达和 4-HIL 生物合成。测试的 18 个 RBS 序列在表达 ido 方面表现出很大的强度差异,产生了 8.10-104.22 mM 的 4-HIL。为了以不同水平供应辅助底物 α-KG,然后在上述最佳菌株 SF01 中使用高、中、低强度的 RBS 序列表达 odhI 基因,该菌株携带 R8-ido。然而,4-HIL 的产量减少到不同的量,在一些菌株中,α-KG 被重新定向到 l-谷氨酸的合成中。接下来,通过过表达 vgb 基因进一步增强了三个 ido-odhI 共表达菌株中的 O 供应,4-HIL 的产量发生了显著变化。在最好的菌株 SF08 中生产了 4-HIL(高达 119.27±5.03 mM),表明辅助底物 α-KG 和 O 的同步供应对于 4-HIL 的高产非常重要。最后,分别在 SF08 中删除 avtA 基因和 ldhA-pyk2 簇以减少丙酮酸衍生的副产物,4-HIL 的产量分别增加到 122.16±5.18 和 139.82±1.56 mM,表明这两个菌株都是生产 4-HIL 的有前途的候选菌株。因此,通过 RBS 工程精细调节 ido 表达和辅助底物供应是提高谷氨酸棒杆菌中 4-HIL 生物合成的有效策略。

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