Xin Shanghong, Zhang Wenjun
School of Life Sciences, Sun Yat-sen University, Guangzhou, China.
Arch Insect Biochem Physiol. 2020 Nov;105(3):e21737. doi: 10.1002/arch.21737. Epub 2020 Sep 14.
Olfaction plays an essential role in feeding and information exchange in insects. Previous studies on the olfaction of silkworms have provided a wealth of information about genes and proteins, yet, most studies have only focused on a single gene or protein related to the insect's olfaction. The aim of the current study is to determine key proteins in the olfactory system of the silkworm, and further understand protein-protein interactions (PPIs) in the olfactory system of Lepidoptera. To achieve this goal, we integrated Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and network analyses. Furthermore, we selected 585 olfactory-related proteins and constructed a (PPI) network for the olfactory system of the silkworm. Network analysis led to the identification of several key proteins, including GSTz1, LOC733095, BGIBMGA002169-TA, BGIBMGA010939-TA, GSTs2, GSTd2, Or-2, and BGIBMGA013255-TA. A comprehensive evaluation of the proteins showed that glutathione S-transferases (GSTs) had the highest ranking. GSTs also had the highest enrichment levels in GO and KEGG. In conclusion, our analysis showed that key nodes in the biological network had a significant impact on the network, and the key proteins identified via network analysis could serve as new research targets to determine their functions in olfaction.
嗅觉在昆虫的进食和信息交流中起着至关重要的作用。以往对家蚕嗅觉的研究已经提供了大量关于基因和蛋白质的信息,然而,大多数研究仅关注与昆虫嗅觉相关的单个基因或蛋白质。本研究的目的是确定家蚕嗅觉系统中的关键蛋白质,并进一步了解鳞翅目昆虫嗅觉系统中的蛋白质-蛋白质相互作用(PPI)。为实现这一目标,我们整合了基因本体论(GO)、京都基因与基因组百科全书(KEGG)以及网络分析。此外,我们选择了585种嗅觉相关蛋白质,并构建了家蚕嗅觉系统的(PPI)网络。网络分析鉴定出了几种关键蛋白质,包括GSTz1、LOC733095、BGIBMGA002169-TA、BGIBMGA010939-TA、GSTs2、GSTd2、Or-2和BGIBMGA013255-TA。对这些蛋白质的综合评估表明,谷胱甘肽S-转移酶(GSTs)排名最高。GSTs在GO和KEGG中的富集水平也最高。总之,我们的分析表明,生物网络中的关键节点对网络有显著影响,通过网络分析鉴定出的关键蛋白质可作为新的研究靶点,以确定它们在嗅觉中的功能。