State Key Laboratory of Crop Stress Biology in Arid Areas, College of Plant Protection, Northwest A&F University, Yangling, China.
Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, National Yangling Agricultural Biotechnology and Breeding Center, Yangling Branch of State Wheat Improvement Centre/Wheat Breeding Engineering Research Center, Northwest A&F University, Yangling, China.
BMC Genomics. 2020 Sep 15;21(1):638. doi: 10.1186/s12864-020-07057-0.
Plant viruses maintain intricate interactions with their vector and non-vector insects and can impact the fitness of insects. However, the details of their molecular and cellular mechanisms have not been studied well. We compared the transcriptome-level responses in vector and non-vector aphids (Schizaphis graminum and Rhopalosiphum padi, respectively) after feeding on wheat plants with viral infections (Barley Yellow Dwarf Virus (BYDV) and Wheat dwarf virus (WDV), respectively). We conducted differentially expressed gene (DEG) annotation analyses and observed DEGs related to immune pathway, growth, development, and reproduction. And we conducted cloning and bioinformatic analyses of the key DEG involved in immune.
For all differentially expressed gene analyses, the numbers of DEGs related to immune, growth, development, reproduction and cuticle were higher in vector aphids than in non-vector aphids. STAT5B (signal transducer and activator of transcription 5B), which is involved in the JAK-STAT pathway, was upregulated in R. padi exposed to WDV. The cloning and bioinformatic results indicated that the RpSTAT5B sequence contains a 2082 bp ORF encoding 693 amino acids. The protein molecular weight is 79.1 kD and pI is 8.13. Analysis indicated that RpSTAT5B is a non-transmembrane protein and a non-secreted protein. Homology and evolutionary analysis indicated that RpSTAT5B was closely related to R. maidis.
Unigene expression analysis showed that the total number of differentially expressed genes (DEGs) in the vector aphids was higher than that in the non-vector aphids. Functional enrichment analysis showed that the DEGs related to immunity, growth and reproduction in vector aphids were higher than those in non-vector aphids, and the differentially expressed genes related to immune were up-regulated. This study provides a basis for the evaluation of the response mechanisms of vector/non-vector insects to plant viruses.
植物病毒与它们的媒介昆虫和非媒介昆虫保持着复杂的相互作用,并能影响昆虫的适应性。然而,它们的分子和细胞机制的细节还没有被很好地研究。我们比较了感染病毒(大麦黄花叶病毒(BYDV)和小麦矮缩病毒(WDV))的小麦上取食的媒介和非媒介蚜虫(分别为禾谷缢管蚜和禾谷缢管蚜)的转录组水平的反应。我们进行了差异表达基因(DEG)注释分析,并观察了与免疫途径、生长、发育和繁殖相关的 DEG。我们还对涉及免疫的关键 DEG 进行了克隆和生物信息学分析。
对于所有差异表达基因分析,与免疫、生长、发育、繁殖和表皮有关的 DEG 在媒介蚜虫中比在非媒介蚜虫中更高。参与 JAK-STAT 途径的 STAT5B(信号转导和转录激活因子 5B)在 R. padi 暴露于 WDV 时上调。克隆和生物信息学结果表明,RpSTAT5B 序列包含一个 2082bp 的 ORF,编码 693 个氨基酸。蛋白质分子量为 79.1kD,pI 为 8.13。分析表明 RpSTAT5B 是一种非跨膜蛋白和非分泌蛋白。同源性和进化分析表明,RpSTAT5B 与 R. maidis 密切相关。
基因表达分析表明,媒介蚜虫中的差异表达基因(DEGs)总数高于非媒介蚜虫。功能富集分析表明,媒介蚜虫中与免疫、生长和繁殖相关的 DEGs 高于非媒介蚜虫,与免疫相关的差异表达基因上调。本研究为评价媒介/非媒介昆虫对植物病毒的反应机制提供了依据。