Bansal Himanshu, Gupta Neha, Roy Sukhdev
Department of Physics and Computer Science, Dayalbagh Educational Institute, Agra 282005 India.
Department of Physics and Computer Science, Dayalbagh Educational Institute, Agra 282005 India.
Neuroscience. 2020 Nov 21;449:165-188. doi: 10.1016/j.neuroscience.2020.09.022. Epub 2020 Sep 15.
Low-power and high-frequency bidirectional control of spatiotemporal patterns of neural spiking is one of the major challenges in optogenetics. A detailed theoretical analysis and optimization with ChR2-NpHR, ChR2(H134R)-eNpHR3.0, Chrimson-GtACR2 and also with prospective opsin pairs namely, Chronos-Jaws, Chronos-eNpHR3.0, CheRiff-Jaws and vf-Chrimson-GtACR2 has been presented. Biophysical circuit models of bidirectional optogenetic control in above opsin pairs expressing hippocampal neurons and fast-spiking neocortical interneurons have been formulated. The models include the important rebound effect of chloride ions and overlapping of absorption spectra. Blue light absorption by red-shifted opsins not only affects the photocurrent, but also its turn-off kinetics. Under continuous illumination, bidirectional control of spiking around 40 Hz in hippocampal neurons requires very low blue and orange light intensities of 0.014 mW/mm and 0.8 mW/mm with CheRiff-Jaws and 0.04 mW/mm, and 0.02 mW/mm with Chrimson-GtACR2, respectively. Under optimal photostimulation and expression density, high-frequency limit of bidirectional control is 60 Hz and 100 Hz with ChR2-NpHR, 60 Hz and 20 Hz with ChR2(H134R)-eNpHR3.0, 90 Hz and 180 Hz with Chronos-Jaws, and 90 Hz and 250 Hz with Chronos-eNpHR3.0 in neurons and interneurons, respectively. Although, Chrimson-GtACR2 enables bidirectional control at very low-power, vf-Chrimson-GtACR2 provides control with reduced cross-talk. The theoretical analysis highlights the usefulness of computational methods to virtually optimize stimulation protocols for optogenetic tool combinations. The study is useful to generate neural codes with desired spatiotemporal resolution and to design optogenetic neuroprosthetic devices and circuits.
对神经脉冲的时空模式进行低功率高频双向控制是光遗传学面临的主要挑战之一。本文对ChR2-NpHR、ChR2(H134R)-eNpHR3.0、Chrimson-GtACR2以及潜在的视蛋白对(即Chronos-Jaws、Chronos-eNpHR3.0、CheRiff-Jaws和vf-Chrimson-GtACR2)进行了详细的理论分析和优化。已构建了表达上述视蛋白对的海马神经元和快速发放的新皮质中间神经元双向光遗传学控制的生物物理电路模型。这些模型包括氯离子的重要反弹效应和吸收光谱的重叠。红移视蛋白对蓝光的吸收不仅影响光电流,还影响其关闭动力学。在持续光照下,使用CheRiff-Jaws时,海马神经元中约40赫兹的脉冲双向控制需要非常低的蓝光和橙光强度,分别为0.014毫瓦/平方毫米和0.8毫瓦/平方毫米;使用Chrimson-GtACR2时,分别为0.04毫瓦/平方毫米和0.02毫瓦/平方毫米。在最佳光刺激和表达密度下,ChR2-NpHR在神经元和中间神经元中的双向控制高频极限分别为60赫兹和100赫兹;ChR2(H134R)-eNpHR3.0为60赫兹和20赫兹;Chronos-Jaws为90赫兹和180赫兹;Chronos-eNpHR3.0为90赫兹和250赫兹。虽然Chrimson-GtACR2能够在非常低的功率下实现双向控制,但vf-Chrimson-GtACR2能在减少串扰的情况下进行控制。理论分析突出了计算方法在虚拟优化光遗传学工具组合刺激方案方面的实用性。该研究对于生成具有所需时空分辨率的神经编码以及设计光遗传学神经假体装置和电路很有用。