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融化 dsDNA 供体分子可极大提高. 中的精确基因组编辑效率。

Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in .

机构信息

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, Massachusetts 01605.

Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts 01605.

出版信息

Genetics. 2020 Nov;216(3):643-650. doi: 10.1534/genetics.120.303564. Epub 2020 Sep 22.

DOI:10.1534/genetics.120.303564
PMID:32963112
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7648581/
Abstract

CRISPR genome editing has revolutionized genetics in many organisms. In the nematode , one injection into each of the two gonad arms of an adult hermaphrodite exposes hundreds of meiotic germ cells to editing mixtures, permitting the recovery of multiple indels or small precision edits from each successfully injected animal. Unfortunately, particularly for long insertions, editing efficiencies can vary widely, necessitating multiple injections, and often requiring coselection strategies. Here, we show that melting double-stranded DNA (dsDNA) donor molecules prior to injection increases the frequency of precise homology-directed repair (HDR) by several fold for longer edits. We describe troubleshooting strategies that enable consistently high editing efficiencies resulting, for example, in up to 100 independent GFP knock-ins from a single injected animal. These efficiencies make by far the easiest metazoan to genome edit, removing barriers to the use and adoption of this facile system as a model for understanding animal biology.

摘要

CRISPR 基因组编辑技术已经彻底改变了许多生物的遗传学。在秀丽隐杆线虫中,只需将编辑混合物注射到每个雌雄同体的两个生殖臂中,就可以使数百个减数分裂生殖细胞暴露于编辑混合物中,从而从每个成功注射的动物中回收多个缺失或小的精确编辑。不幸的是,特别是对于长插入,编辑效率差异很大,需要多次注射,并且经常需要共选择策略。在这里,我们表明,在注射之前使双链 DNA(dsDNA)供体分子熔化可以使较长编辑的精确同源定向修复(HDR)频率提高几倍。我们描述了一些故障排除策略,这些策略可确保始终保持较高的编辑效率,例如,从单个注射的动物中获得多达 100 个独立的 GFP 敲入。这些效率使秀丽隐杆线虫成为迄今为止最容易进行基因组编辑的动物,消除了使用和采用这种简便系统作为理解动物生物学模型的障碍。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/8750a6ce031c/643f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/c587102d0f5f/643f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/045855e4377c/643f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/8750a6ce031c/643f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/c587102d0f5f/643f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/045855e4377c/643f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95f/7648581/8750a6ce031c/643f3.jpg

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