Department of Biochemistry, University of Missouri, Columbia, Missouri, USA.
Department of Biochemistry, University of Missouri, Columbia, Missouri, USA
J Bacteriol. 2020 Nov 19;202(24). doi: 10.1128/JB.00462-20.
Precursor proteins are translocated across the cytoplasmic membrane in by the general secretory, or Sec, pathway. The main components of the pathway are the integral membrane heterotrimeric SecYEG complex and the peripheral membrane ATPase, SecA. In this study, we have applied an assay using inverted cytoplasmic membrane vesicles to investigate the complex cycle that leads to translocation. We compared the apparent rate constants for nine precursors under two experimental conditions, single turnover and multiple turnovers. For each precursor, the rate constant for a single turnover was higher than for multiple turnovers, indicating that a different step limits the rate under the two conditions. We conclude that the rate-limiting step for a single turnover is an early step in the initial phase of transit through the channel, whereas the rate of multiple turnovers is limited by the resetting of the translocon. The presence of the chaperone SecB during multiple turnovers increased the maximal amplitude translocated for the three precursor species tested, pGBP, pPhoA, and proOmpA, and also increased the apparent rate constants for both pGBP and pPhoA. The rate constant for proOmpA was decreased by the presence of SecB. Vastly different experimental techniques and conditions have been used to study export in We demonstrated that altering experimental conditions can change the step that is observed during study. Investigators should consider specific experimental conditions when comparing data from different laboratories, as well as when comparing data from different experiments within a laboratory. We have shown that each precursor species has inherent properties that determine the translocation rate; thus generalizations from studies of a single species must be made with caution. A summary of advantages and disadvantages in use of nine precursors is presented.
前体蛋白通过一般分泌途径,即 Sec 途径,跨细胞质膜易位。该途径的主要成分是整合膜异三聚体 SecYEG 复合物和外周膜 ATP 酶 SecA。在这项研究中,我们应用了一种使用倒置细胞质膜囊泡的 分析来研究导致易位的复杂循环。我们比较了在两种实验条件下单次周转和多次周转下九种前体的表观速率常数。对于每种前体,单次周转的速率常数都高于多次周转,表明在两种条件下,不同的步骤限制了速率。我们得出结论,单次周转的限速步骤是通过通道初始阶段的早期步骤,而多次周转的速率受转位器重置的限制。在多次周转期间存在伴侣蛋白 SecB 增加了三种测试的前体物种(pGBP、pPhoA 和 proOmpA)的最大转运幅度,也增加了 pGBP 和 pPhoA 的表观速率常数。SecB 的存在降低了 proOmpA 的速率常数。 我们使用了截然不同的实验技术和条件来研究 中的出口。我们证明改变实验条件可以改变研究过程中观察到的步骤。研究人员在比较来自不同实验室的数据时,以及在比较实验室内部不同实验的数据时,应考虑特定的实验条件。我们已经表明,每种前体物种都具有决定易位速率的固有特性;因此,必须谨慎地从对单一物种的研究中得出一般性结论。还介绍了使用九种前体的优缺点总结。