Suppr超能文献

基于生物砖的“快速基因组装”

BioBrick-based 'Quick Gene Assembly' .

作者信息

Yamazaki Ken-Ichi, de Mora Kim, Saitoh Kensuke

机构信息

Laboratory of Environmental Molecular Biology, Faculty of Environmental Earth Science, Hokkaido University, Kita 10, Nishi 5, Kita-ku, Sapporo 060-0810, Japan.

iGEM Foundation, One Kendall Square, Cambridge, MA 02139, USA.

出版信息

Synth Biol (Oxf). 2017 Jun 14;2(1):ysx003. doi: 10.1093/synbio/ysx003. eCollection 2017 Jan.

Abstract

Because of the technological limitations of DNA synthesis in (i) making constructs containing tandemly repeated DNA sequence units, (ii) making an unbiased DNA library containing DNA fragments with sequence multiplicity in a specific region of target genes, and (iii) replacing DNA fragments, development of efficient and reliable biochemical gene assembly methods is still anticipated. We succeeded in developing a biological standardized genetic parts that are flanked between a common upstream and downstream nucleotide sequences in an appropriate plasmid DNA vector (BioBrick)-based novel assembly method that can be used to assemble genes composed of 25 tandemly repeated BioBricks in the correct format . We named our new DNA part assembly system: 'Quick Gene Assembly (QGA)'. The time required for finishing a sequential fusion of five BioBricks is less than 24 h. We believe that the QGA method could be one of the best methods for 'gene construction based on engineering principles' at the present time, and is also a method suitable for automation in the near future.

摘要

由于DNA合成在以下方面存在技术限制:(i)构建包含串联重复DNA序列单元的构建体;(ii)构建一个无偏差的DNA文库,该文库包含目标基因特定区域中具有序列多样性的DNA片段;以及(iii)替换DNA片段,因此仍期待开发高效且可靠的生化基因组装方法。我们成功开发了一种基于合适的质粒DNA载体(生物砖)的新型组装方法,该方法可用于以正确格式组装由25个串联重复生物砖组成的基因,该方法所产生的生物标准化遗传元件两侧为常见的上游和下游核苷酸序列。我们将我们的新DNA元件组装系统命名为“快速基因组装(QGA)”。完成五个生物砖的顺序融合所需的时间不到24小时。我们相信,QGA方法可能是目前“基于工程原理的基因构建”的最佳方法之一,并且也是一种在不久的将来适合自动化的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb3d/7513740/e6b04e64f0cb/ysx003f1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验