Lamar Sarah K, Beddows Ian, Partridge Charlyn G
Annis Water Resources Institute Grand Valley State University Muskegon Michigan USA.
Present address: School of Biological Sciences Victoria University of Wellington Wellington New Zealand.
Ecol Evol. 2020 Aug 31;10(18):10254-10270. doi: 10.1002/ece3.6688. eCollection 2020 Sep.
Invasive species provide an opportune system to investigate how populations respond to new environments. Baby's breath () was introduced to North America in the 1800s and has since spread throughout the United States and western Canada. We used an RNA-seq approach to explore how molecular processes contribute to the success of invasive populations with similar genetic backgrounds across distinct habitats. Transcription profiles were constructed from seedlings collected from a sand dune ecosystem in Petoskey, MI (PSMI), and a sagebrush ecosystem in Chelan, WA (CHWA). We assessed differential gene expression and identified SNPs within differentially expressed genes. We identified 1,146 differentially expressed transcripts across all sampled tissues between the two populations. GO processes enriched in PSMI were associated with nutrient starvation, while enriched processes in CHWA were associated with abiotic stress. Only 7.4% of the differentially expressed transcripts contained SNPs differing in allele frequencies of at least 0.5 between populations. Common garden studies found the two populations differed in germination rate and seedling emergence success. Our results suggest the success of in these two environments is likely due to plasticity in specific molecular processes responding to different environmental conditions, although some genetic divergence may be contributing to these differences.
入侵物种为研究种群如何应对新环境提供了一个合适的系统。满天星于19世纪被引入北美,此后已蔓延至美国全境和加拿大西部。我们采用RNA测序方法来探究分子过程如何促进具有相似遗传背景的入侵种群在不同栖息地取得成功。转录谱是根据从密歇根州佩托斯基的沙丘生态系统(PSMI)和华盛顿州 Chelan的蒿属植物生态系统(CHWA)采集的幼苗构建的。我们评估了差异基因表达,并在差异表达基因中鉴定了单核苷酸多态性(SNP)。我们在两个种群的所有采样组织中鉴定出1146个差异表达转录本。PSMI中富集的基因本体(GO)过程与营养饥饿相关,而CHWA中富集的过程与非生物胁迫相关。在差异表达转录本中,只有7.4%包含种群间等位基因频率差异至少为0.5的SNP。共同花园实验发现这两个种群在发芽率和幼苗出土成功率方面存在差异。我们的结果表明,满天星在这两种环境中的成功可能归因于特定分子过程对不同环境条件的可塑性反应,尽管一些遗传差异可能也导致了这些差异。