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优化选择蛋白质中甲基的慢弛豫 C 跃迁:在弛豫弥散中的应用。

Optimized selection of slow-relaxing C transitions in methyl groups of proteins: application to relaxation dispersion.

机构信息

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD, 20892-0520, USA.

出版信息

J Biomol NMR. 2020 Dec;74(12):673-680. doi: 10.1007/s10858-020-00349-3. Epub 2020 Oct 1.

DOI:10.1007/s10858-020-00349-3
PMID:33006092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7704780/
Abstract

Optimized selection of the slow-relaxing components of single-quantum C magnetization in CH methyl groups of proteins using acute (< 90°) angle H radio-frequency pulses, is described. The optimal selection scheme is more relaxation-tolerant and provides sensitivity gains in comparison to the experiment where the undesired (fast-relaxing) components of C magnetization are simply 'filtered-out' and only 90° H pulses are employed for magnetization transfer to and from C nuclei. When applied to methyl C single-quantum Carr-Purcell-Meiboom-Gill (CPMG) relaxation dispersion experiments for studies of chemical exchange, the selection of the slow-relaxing C transitions results in a significant decrease in intrinsic (exchange-free) transverse spin relaxation rates of all exchanging species. For exchanging systems involving high-molecular-weight species, the lower transverse relaxation rates translate into an increase in the information content of the resulting relaxation dispersion profiles.

摘要

优化选择蛋白质中 CH 甲基单量子 C 磁化的慢弛豫成分,使用急性(<90°)角 H 射频脉冲,进行了描述。与实验相比,该最优选择方案具有更高的弛豫容忍度,并提供了灵敏度增益,在该实验中,C 磁化的不需要的(快弛豫)成分只是“过滤掉”,仅使用 90°H 脉冲进行从 C 核到 C 核的磁化转移。当应用于用于研究化学交换的甲基 C 单量子 Carr-Purcell-Meiboom-Gill(CPMG)弛豫色散实验时,对慢弛豫 C 跃迁的选择导致所有交换物种的固有(无交换)横向自旋弛豫率显著降低。对于涉及高分子量物质的交换体系,较低的横向弛豫率转化为产生的弛豫色散谱图的信息量增加。

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本文引用的文献

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Methyl TROSY spectroscopy: A versatile NMR approach to study challenging biological systems.甲基 TROSY 光谱学:一种用于研究具有挑战性的生物系统的多功能 NMR 方法。
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Determining methyl sidechain conformations in a CS-ROSETTA model using methyl H-C residual dipolar couplings.使用甲基氢 C 残留偶极耦合确定 CS-ROSETTA 模型中的甲基侧链构象。
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Optimized NMR Experiments for the Isolation of I=1/2 Manifold Transitions in Methyl Groups of Proteins.优化的 NMR 实验用于分离蛋白质中甲基的 I=1/2 分量跃迁。
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Unraveling the structure and dynamics of the human DNAJB6b chaperone by NMR reveals insights into Hsp40-mediated proteostasis.通过 NMR 技术揭示人类 DNAJB6b 伴侣蛋白的结构和动态,深入了解 Hsp40 介导的蛋白质稳态。
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