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通过RNA测序对薰衣草精油引起的应激条件下的转录组分析。 (注:原英文中“L.”指代不明,这里按“薰衣草”推测翻译,若有更准确指代请根据实际调整)

Transcriptomic Analysis of Under the Stress Condition Caused by L. Essential Oil via RNA Sequencing.

作者信息

Yang Yunqiao, Chen Yunru, Zhang Geyin, Sun Junying, Guo Lei, Jiang Mingsheng, Ou Bingming, Zhang Weiyu, Si Hongbin

机构信息

College of Animal Sciences and Technology, Guangxi University, Nanning, China.

College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China.

出版信息

Front Microbiol. 2020 Sep 8;11:1693. doi: 10.3389/fmicb.2020.01693. eCollection 2020.

Abstract

L. essential oil (LCEO) is a natural essential oil with considerable antimicrobial activity, and it can gradually replace some chemical additives in the food industry. However, the genetic evidences of stress response of bacteria under sub-lethal treatment with LCEO is limited. To this end, transcriptomic analysis of 29213 under a low concentration of LCEO was performed. Bacterial RNA samples were extracted from 1/4 MIC (0.07 μL/mL) of LCEO-treated and non-treated 29213. The transcriptional results were obtained by RNA sequencing (RNA-Seq). After treated with LCEO of 29213, 300, and 242 genes were significantly up and down-regulated. Up-regulated genes were mainly related to cell membrane (wall) stress stimulon including genes related to two-component regulatory system (), histidine metabolism ( etc.) and L-lysine biosynthesis ( etc.). Significant differences were also founded between LCEO-treated and non-treated groups in peptidoglycan biosynthesis related pathways. Down-regulated genes were related to nitrogen metabolism ( etc.), carotenoid biosynthesis (all) and pyruvate metabolism ( etc.) of 29213 in an LCEO-existing environment compared to the control. At the same time, we confirmed that LCEO can significantly affect the staphyloxanthin level of 29213 for the first time, which is closely related to the redox state of 29213. These evidences expanded the knowledge of stress response of 29213 strain under sub-lethal concentration of LCEO.

摘要

罗勒精油(LCEO)是一种具有相当抗菌活性的天然精油,它可以逐渐取代食品工业中的一些化学添加剂。然而,细菌在亚致死剂量LCEO处理下应激反应的遗传学证据有限。为此,对低浓度LCEO处理下的29213进行了转录组分析。从LCEO处理和未处理的29213的1/4 MIC(0.07μL/mL)中提取细菌RNA样本。通过RNA测序(RNA-Seq)获得转录结果(转录组结果)。用LCEO处理29213后,分别有300个和242个基因显著上调和下调。上调基因主要与细胞膜(壁)应激刺激子相关,包括与双组分调节系统相关的基因(如某些基因)、组氨酸代谢相关基因(如某些基因)和L-赖氨酸生物合成相关基因(如某些基因)。在肽聚糖生物合成相关途径中,LCEO处理组和未处理组之间也存在显著差异。与对照相比,在存在LCEO的环境中,下调基因与29213的氮代谢(如某些基因)、类胡萝卜素生物合成(所有相关基因)和丙酮酸代谢(如某些基因)有关。同时,我们首次证实LCEO可显著影响29213的葡萄球菌黄素水平,这与29213的氧化还原状态密切相关。这些证据扩展了对29213菌株在亚致死浓度LCEO下应激反应的认识。 (注:原文中部分基因名称等表述不完整,翻译时尽量保留原文形式)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca23/7509438/394791bdbe44/fmicb-11-01693-g001.jpg

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