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鉴定和精细定位一个位于大豆 5 号染色体上的数量性状位点,该位点赋予大豆缺铁性黄化耐性。

Identification and Fine-Mapping of a Soybean Quantitative Trait Locus on Chromosome 5 Conferring Tolerance to Iron Deficiency Chlorosis.

机构信息

Dep. of Agronomy and Plant Genetics, Univ. of Minnesota, Saint Paul, MN, 55108.

Bayer Crop Science, 704 12th Street, Kalona, IA, 52247.

出版信息

Plant Genome. 2019 Nov;12(3):1-13. doi: 10.3835/plantgenome2019.01.0007.

DOI:10.3835/plantgenome2019.01.0007
PMID:33016589
Abstract

CORE IDEAS

'Fiskeby III' harbors a combination of abiotic stress traits, including iron deficiency chlorosis (IDC) tolerance. An IDC quantitative trait locus on chromosome Gm05 was identified in genome-wide association studies and biparental populations. Fine-mapping resolved a 137-kb interval containing strong candidate genes. Iron deficiency chlorosis (IDC) is an important nutrient stress for soybean [Glycine max (L.) Merr.] grown in high-pH soils. Despite numerous agronomic attempts to alleviate IDC, genetic tolerance remains the most effective preventative measure against symptoms. In this study, two association mapping populations and a biparental mapping population were used for genetic mapping of IDC tolerance. Quantitative trait loci (QTLs) were identified on chromosomes Gm03, Gm05, and Gm06. Heterogenous inbred families were developed to fine-map the Gm05 QTL, which was uniquely supported in all three mapping populations. Fine-mapping resulted in a QTL with an interval size of 137 kb on the end of the short arm of Gm05, which produced up to a 1.5-point reduction in IDC severity on a 1 to 9 scale in near isogenic lines.

摘要

核心思想

“Fiskeby III”具有多种非生物胁迫特性,包括缺铁性黄化(IDC)耐受性。在全基因组关联研究和双亲群体中鉴定到了 IDC 数量性状位点(QTL)位于染色体 Gm05 上。精细定位确定了一个包含强候选基因的 137kb 间隔。缺铁性黄化(IDC)是在高 pH 土壤中生长的大豆 [Glycine max(L.)Merr.] 的重要营养胁迫。尽管在缓解 IDC 方面进行了许多农业尝试,但遗传耐受性仍然是预防症状的最有效措施。在这项研究中,使用两个关联作图群体和一个双亲作图群体对 IDC 耐受性进行遗传作图。在染色体 Gm03、Gm05 和 Gm06 上鉴定到了数量性状位点(QTL)。杂种自交系被开发用于 Gm05 QTL 的精细作图,该 QTL 在所有三个作图群体中都得到了独特的支持。精细作图导致 Gm05 短臂末端的 QTL 间隔大小为 137kb,在近等基因系中,IDC 严重程度的评分从 1 到 9 降低了 1.5 点。

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