波兰分离的玉米病原菌基因组序列资源。

Genome Sequence Resources for the Maize Pathogen Isolated in Poland.

机构信息

Department of Plant Protection, Institute of Horticultural Sciences, Warsaw University of Life Science, 02-776 Warsaw, Poland.

Department of Plant Pathology, North Dakota State University, Fargo, ND 58108, U.S.A.

出版信息

Mol Plant Microbe Interact. 2021 Feb;34(2):214-217. doi: 10.1094/MPMI-09-20-0266-A. Epub 2020 Dec 4.

DOI:10.1094/MPMI-09-20-0266-A

PMID:33064593

Abstract

(Scaufl. & Munaut) is one of the most important fungal pathogens that cause ear and stalk rots in maize. In this study, we sequenced genomes of two isolates (KFI615 and KFI660) isolated from corn ears in Poland. A total of 110.3 and 116.3 million 100-nucleotide paired-end clean reads were obtained for KFI615 and KFI660, which were assembled into 20 and 18 scaffolds with an estimated genome size of 45.21 and 45.00 Mb, respectively. These genome sequences provide important resources for understanding pathogenicity and biology of the pathogens within the complex.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.

摘要

(Scaufl. & Munaut) 是一种重要的真菌病原体，可引起玉米的耳腐病和茎腐病。在本研究中，我们对从波兰玉米穗上分离到的两个分离株（KFI615 和 KFI660）进行了基因组测序。KFI615 和 KFI660 分别获得了总计 1.103 亿和 1.163 亿对 100 个核苷酸的配对末端清洁读数，这些读数组装成 20 个和 18 个支架，估计基因组大小分别为 45.21 和 45.00Mb。这些基因组序列为了解该复合体中病原体的致病性和生物学特性提供了重要资源。[Formula: see text] 版权所有 © 2021 作者。这是一份在 CC BY-NC-ND 4.0 国际许可下发布的开放获取文章。