School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Jiangsu Key Laboratory for Food Quality and Safety-State Key Laboratory Cultivation Base, Ministry of Science and Technology/Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs/Key Laboratory for Agro-product Safety Risk Evaluation (Nanjing), Ministry of Agriculture and Rural Affairs/Collaborative Innovation Center for Modern Grain Circulation and Safety/Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, Jiangsu, China.
Mol Plant Microbe Interact. 2022 Jan;35(1):85-89. doi: 10.1094/MPMI-07-21-0182-A. Epub 2021 Dec 17.
Members of the species complex (FGSC) cause extensive yield losses in cereal production worldwide, and food safety concerns due to the accumulation of toxins in infected grains. Among these pathogens, is responsible for Fusarium head blight of wheat and rice, ear and stalk rot of maize, and pod blight of soybean. Here, we present an improved genome assembly of strain SR5 isolated from rice in China based on PacBio long-read sequencing and Illumina short-read sequencing technology. The assembled genome of SR5 has a total size of 36.82 Mb, an N scaffold length of 7.82 Mb, nine scaffolds, and encodes 12,409 predicted genes. These high-quality data expand FGSC genomic resources and provide a valuable resource for better understanding their genetic diversity and the molecular basis of pathogenesis, which will facilitate the development of an effective control strategy.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
种复合体（FGSC）的成员在全球范围内导致谷物产量的大量损失，并且由于受感染谷物中 毒素的积累，对食品安全产生了担忧。在这些病原体中， 负责小麦和水稻的赤霉病、玉米的穗腐和茎腐以及大豆的荚腐。在这里，我们基于 PacBio 长读测序和 Illumina 短读测序技术，展示了从中国水稻中分离到的 菌株 SR5 的改良基因组组装。SR5 的组装基因组大小为 36.82Mb，N 支架长度为 7.82Mb，有九个支架，编码 12409 个预测基因。这些高质量的数据扩展了 FGSC 的基因组资源，为更好地了解其遗传多样性和发病机制的分子基础提供了有价值的资源，这将有助于制定有效的控制策略。
