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无规卷曲蛋白区域如何编码液-液相分离的驱动力?

How do intrinsically disordered protein regions encode a driving force for liquid-liquid phase separation?

机构信息

Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.

Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.

出版信息

Curr Opin Struct Biol. 2021 Apr;67:41-50. doi: 10.1016/j.sbi.2020.09.004. Epub 2020 Oct 15.

DOI:10.1016/j.sbi.2020.09.004
PMID:33069007
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8044266/
Abstract

Liquid-liquid phase separation is the mechanism underlying the formation of biomolecular condensates. Disordered protein regions often drive phase separation, but the molecular interactions mediating this phenomenon are not well understood, sometimes leading to the conflation that all disordered protein regions drive phase separation. Given the critical role of phase separation in many cellular processes, and that dysfunction of phase separation can lead to debilitating diseases, it is important that we understand the interactions and sequence properties underlying phase behavior. A conceptual framework that divides IDRs into interacting and solvating regions has proven particularly useful, and analytical instantiations and coarse-grained models can test our understanding of the driving forces against experimental phase behavior. Validated simulation paradigms enable the exploration of sequence space to help our understanding of how disordered protein regions can encode phase behavior, which IDRs may mediate phase separation in cells, and which IDRs are highly soluble.

摘要

液-液相分离是生物分子凝聚物形成的机制。无序蛋白质区域通常驱动相分离,但介导这种现象的分子相互作用尚不清楚,有时会导致混淆,即所有无序蛋白质区域都驱动相分离。鉴于相分离在许多细胞过程中的关键作用,以及相分离功能障碍会导致衰弱性疾病,了解相行为的相互作用和序列特性非常重要。将 IDR 划分为相互作用和溶剂化区域的概念框架已被证明特别有用,并且分析实例和粗粒度模型可以根据实验相行为来检验我们对驱动力的理解。经过验证的模拟范例可用于探索序列空间,以帮助我们了解无序蛋白质区域如何编码相行为、哪些 IDR 可能在细胞中介导相分离以及哪些 IDR 具有高可溶性。