Kochi Institute for Core Sample Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Nankoku, 783-8502 Kochi, Japan;
Graduate School of Simulation Studies, University of Hyogo, Kobe, 650-0047 Hyogo, Japan;
Proc Natl Acad Sci U S A. 2020 Nov 3;117(44):27587-27597. doi: 10.1073/pnas.1919139117. Epub 2020 Oct 19.
Microbial life in marine sediment contributes substantially to global biomass and is a crucial component of the Earth system. Subseafloor sediment includes both aerobic and anaerobic microbial ecosystems, which persist on very low fluxes of bioavailable energy over geologic time. However, the taxonomic diversity of the marine sedimentary microbial biome and the spatial distribution of that diversity have been poorly constrained on a global scale. We investigated 299 globally distributed sediment core samples from 40 different sites at depths of 0.1 to 678 m below the seafloor. We obtained ∼47 million 16S ribosomal RNA (rRNA) gene sequences using consistent clean subsampling and experimental procedures, which enabled accurate and unbiased comparison of all samples. Statistical analysis reveals significant correlations between taxonomic composition, sedimentary organic carbon concentration, and presence or absence of dissolved oxygen. Extrapolation with two fitted species-area relationship models indicates taxonomic richness in marine sediment to be 7.85 × 10 to 6.10 × 10 and 3.28 × 10 to 2.46 × 10 amplicon sequence variants for Archaea and Bacteria, respectively. This richness is comparable to the richness in topsoil and the richness in seawater, indicating that Bacteria are more diverse than Archaea in Earth's global biosphere.
海洋沉积物中的微生物生命对全球生物量有很大贡献,是地球系统的重要组成部分。海底沉积物包括好氧和厌氧微生物生态系统,它们在地质时间内以非常低的可用能量通量持续存在。然而,海洋沉积物微生物生物群的分类多样性及其空间分布在全球范围内受到严重限制。我们研究了来自全球 40 个不同地点、水深 0.1 至 678 米的 299 个沉积物岩芯样本。我们使用一致的清洁亚采样和实验程序获得了约 4700 万个 16S 核糖体 RNA(rRNA)基因序列,这使得所有样本能够进行准确和无偏的比较。统计分析显示分类组成、沉积物有机碳浓度以及溶解氧的存在与否之间存在显著相关性。两种拟合的种-面积关系模型的外推表明,海洋沉积物的分类丰富度分别为古菌的 7.85×10 到 6.10×10 和细菌的 3.28×10 到 2.46×10 扩增子序列变体。这种丰富度与表土和海水的丰富度相当,表明细菌在地球全球生物圈中的多样性大于古菌。