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中国舌鳎(Cynoglossus semilaevis)对热应激的早期响应:不同性别、候选基因和网络的表现。

Early response to heat stress in Chinese tongue sole (Cynoglossus semilaevis): performance of different sexes, candidate genes and networks.

机构信息

Key Lab of Sustainable Development of Marine Fisheries, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Nanjing Road 106, Qingdao, 266071, China.

Laboratory for Marine Fisheries Science and Food Production Processes, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China.

出版信息

BMC Genomics. 2020 Oct 27;21(1):745. doi: 10.1186/s12864-020-07157-x.

Abstract

BACKGROUND

Temperature is known to affect living organisms and alter the expression of responsive genes, which affects a series of life processes, such as development, reproduction and metabolism. Several genes and gene families have been involved in high temperature responses, such as heat shock protein (hsp) family, Jumonji family and genes related to cortisol synthesis. Gonad is a vital organ related to the existence of a species. However, the comprehensive understanding of gonadal responses to environmental temperature is limited.

RESULTS

To explore the effects of environmental temperature on genes and gene networks in gonads, we performed acute heat treatment (48 h) on Chinese tongue sole (Cynoglossus semilaevis). Gonadal transcriptome analysis was conducted on females, pseudomales and males exposed to high (28 °C) and normal (22 °C) temperatures. A total of 1226.24 million clean reads were obtained from 18 libraries. Principal component analysis (PCA) and differentially expressed gene (DEG) analysis revealed different performance of sex responses to heat stress. There were 4565, 790 and 1117 specific genes altered their expression level in females, pseudomales and males, respectively. Of these, genes related to hsp gene family, cortisol synthesis and metabolism and epigenetic regulation were involved in early heat response. Furthermore, a total of 1048 DEGs were shared among females, pesudomales and males, which may represent the inherent difference between high and normal temperatures. Genes, such as eef1akmt3, eef1akmt4, pnmt and hsp family members, were found.

CONCLUSIONS

Our results depicted for the first time the gonadal gene expression under acute high temperature treatment in Chinese tongue sole. The findings may provide a clue for understanding the responses of genes and networks to environmental temperature.

摘要

背景

温度已知会影响生物并改变响应基因的表达,从而影响一系列生命过程,如发育、繁殖和代谢。已经有几个基因和基因家族参与了高温响应,如热休克蛋白(hsp)家族、Jumonji 家族和与皮质醇合成相关的基因。性腺是与物种存在相关的重要器官。然而,对环境温度对性腺基因和基因网络的综合理解是有限的。

结果

为了探讨环境温度对中国舌鳎性腺基因和基因网络的影响,我们对雌性、假雄和雄性中国舌鳎进行了急性热处理(48 小时),处理温度分别为高温(28°C)和正常温度(22°C)。对暴露于高温和正常温度的雌、假雄和雄鱼性腺进行了转录组分析,共获得了 18 个文库的 1226.24 百万个清洁读段。主成分分析(PCA)和差异表达基因(DEG)分析显示,性别对热应激的反应表现不同。在雌性、假雄和雄性中,分别有 4565、790 和 1117 个特定基因改变了其表达水平。其中,与 hsp 基因家族、皮质醇合成和代谢以及表观遗传调控相关的基因参与了早期的热响应。此外,在雌性、假雄和雄性中共有 1048 个 DEG 共享,这可能代表了高温和正常温度之间的固有差异。发现了一些基因,如 eef1akmt3、eef1akmt4、pnmt 和 hsp 家族成员等。

结论

本研究首次描绘了中国舌鳎在急性高温处理下的性腺基因表达情况。这些发现可能为理解基因和网络对环境温度的响应提供线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa76/7590793/fdc30c7d7d83/12864_2020_7157_Fig1_HTML.jpg

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