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基于网络药理学方法探讨稳心颗粒治疗心房颤动的分子靶点及作用通路

Molecular Targets and Pathways Contributing to the Effects of Wenxin Keli on Atrial Fibrillation Based on a Network Pharmacology Approach.

作者信息

Zhang Yujie, Zhang Xiaolin, Zhang Xi, Cai Yi, Cheng Minghui, Yan Chenghui, Han Yaling

机构信息

Liaoning University of Traditional Chinese Medicine, Liaoning, Shenyang 110847, China.

Cardiovascular Research Institute and Department of Cardiology, The General Hospital of Northern Theatre Command, Liaoning, Shenyang 110840, China.

出版信息

Evid Based Complement Alternat Med. 2020 Oct 7;2020:8396484. doi: 10.1155/2020/8396484. eCollection 2020.

Abstract

BACKGROUND

Atrial fibrillation (AF) is the most common sustained arrhythmia and is associated with high rates of mortality and morbidity. The traditional Chinese medicine Wenxin Keli (WXKL) can effectively improve clinical symptoms and is safe for the treatment of AF. However, the active substances in WXKL and the molecular mechanisms underlying its effects on AF remain unclear. In this study, the bioactive compounds in WXKL, as well as their molecular targets and associated pathways, were evaluated by systems pharmacology.

MATERIALS AND METHODS

Chemical constituents and potential targets of WXKL were obtained via the Traditional Chinese Medicine Systems Pharmacology (TCMSP). The TTD, DrugBank, DisGeNET, and GeneCards databases were used to collect AF-related target genes. Based on common targets related to both AF and WXKL, a protein interaction network was generated using the STRING database. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGGs) pathway enrichment analyses were performed. Network diagrams of the active component-target and protein-protein interactions (PPIs) were constructed using Cytoscape.

RESULTS

A total of 30 active ingredients in WXKL and 219 putative target genes were screened, including 83 genes identified as therapeutic targets in AF; these overlapping genes were considered candidate targets for subsequent analyses. The effect of treating AF was mainly correlated with the regulation of target proteins, such as IL-6, TNF, AKT1, VEGFA, CXCL8, TP53, CCL2, MMP9, CASP3, and NOS3. GO and KEGG analyses revealed that these targets are associated with the inflammatory response, oxidative stress reaction, immune regulation, cardiac energy metabolism, serotonergic synapse, and other pathways.

CONCLUSIONS

This study demonstrated the multicomponent, multitarget, and multichannel characteristics of WXKL, providing a basis for further studies of the mechanism underlying the beneficial effects of WXKL in AF.

摘要

背景

心房颤动(AF)是最常见的持续性心律失常,与高死亡率和发病率相关。中药稳心颗粒(WXKL)可有效改善临床症状,治疗AF安全有效。然而,WXKL中的活性成分及其对AF作用的分子机制尚不清楚。本研究采用系统药理学方法评估WXKL中的生物活性化合物及其分子靶点和相关通路。

材料与方法

通过中药系统药理学数据库(TCMSP)获取WXKL的化学成分和潜在靶点。利用治疗靶点数据库(TTD)、药物银行(DrugBank)、疾病基因数据库(DisGeNET)和基因卡片数据库(GeneCards)收集AF相关的靶基因。基于AF和WXKL的共同靶点,使用STRING数据库生成蛋白质相互作用网络。进行基因本体(GO)和京都基因与基因组百科全书(KEGG)通路富集分析。使用Cytoscape构建活性成分-靶点和蛋白质-蛋白质相互作用(PPI)的网络图。

结果

共筛选出WXKL中的30种活性成分和219个潜在靶基因,其中83个基因被确定为AF的治疗靶点;这些重叠基因被视为后续分析的候选靶点。治疗AF的作用主要与靶蛋白如白细胞介素-6(IL-6)、肿瘤坏死因子(TNF)、蛋白激酶B1(AKT1)、血管内皮生长因子A(VEGFA)、趋化因子CXCL8、肿瘤蛋白p53(TP53)、趋化因子CCL2、基质金属蛋白酶9(MMP9)、半胱天冬酶3(CASP3)和一氧化氮合酶3(NOS3)的调控相关。GO和KEGG分析表明,这些靶点与炎症反应、氧化应激反应、免疫调节、心脏能量代谢、5-羟色胺能突触等通路相关。

结论

本研究证明了WXKL的多成分、多靶点和多途径特征,为进一步研究WXKL对AF有益作用的机制提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec25/7586041/093a4dcd7988/ECAM2020-8396484.001.jpg

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