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扁卷螺属 Clavelina oblonga 在本地和入侵范围的微生物组变异性。

Microbiome Variability across the Native and Invasive Ranges of the Ascidian Clavelina oblonga.

机构信息

Department of Biology & Marine Biology, University of North Carolina Wilmington, Wilmington, North Carolina, USA.

Center for Marine Science, University of North Carolina Wilmington, Wilmington, North Carolina, USA.

出版信息

Appl Environ Microbiol. 2021 Jan 4;87(2). doi: 10.1128/AEM.02233-20.

Abstract

Ascidians are prolific colonizers of new environments and possess a range of well-studied features that contribute to their successful spread, but the role of their symbiotic microbial communities in their long-term establishment is mostly unknown. In this study, we utilized next-generation amplicon sequencing to provide a comprehensive description of the microbiome in the colonial ascidian and examined differences in the composition, diversity, and structure of symbiont communities in the host's native and invasive ranges. To identify host haplotypes, we sequenced a fragment of the mitochondrial gene cytochrome oxidase subunit I (COI). harbored a diverse microbiome spanning 42 bacterial and three archaeal phyla. Colonies in the invasive range hosted significantly less diverse symbiont communities and exhibited lower COI haplotype diversity than colonies in the native range. Differences in microbiome structure were also detected across colonies in the native and invasive range, driven largely by novel bacteria representing symbiont lineages with putative roles in nitrogen cycling. Variability in symbiont composition was also observed among sites within each range. Together, these data suggest that hosts a dynamic microbiome resulting from (i) reductions in symbiont diversity due to founder effects in host populations and (ii) environmental selection of symbiont taxa in response to new habitats within a range. Further investigation is required to document the mechanisms behind these changes and to determine how changes in microbiome structure relate to holobiont function and the successful establishment of worldwide. Nonnative species destabilize coastal ecosystems and microbial symbionts may facilitate their spread by enhancing host survival and fitness. However, we know little of the microorganisms that live inside invasive species and whether they change as the host spreads to new areas. In this study, we investigated the microbial communities of an introduced ascidian () and tracked symbiont changes across locations within the host's native and invasive ranges. Ascidians in the invasive range had less-diverse microbiomes, as well as lower host haplotype diversity, suggesting that specific colonies reach new locations and carry select symbionts from native populations (i.e., founder effects). Further, ascidians in the invasive range hosted a different composition of symbionts, including microbes with the potential to aid in processes related to invasion success (e.g., nutrient cycling). We conclude that the putative functionality and observed flexibility of this introduced ascidian microbiome may represent an underappreciated factor in the successful establishment of nonnative species in new environments.

摘要

海鞘是新环境中大量繁殖的殖民者,具有一系列经过充分研究的特征,有助于它们的成功传播,但它们共生微生物群落在其长期定殖中的作用在很大程度上是未知的。在这项研究中,我们利用下一代扩增子测序技术,全面描述了群居海鞘的微生物组,并研究了宿主原生和入侵范围中共生体群落组成、多样性和结构的差异。为了鉴定宿主单倍型,我们对线粒体基因细胞色素氧化酶亚基 I (COI)的一个片段进行了测序。 拥有跨越 42 个细菌和 3 个古菌门的多样化微生物组。入侵范围的殖民地拥有明显较少多样化的共生体群落,并且表现出比原生范围的殖民地更低的 COI 单倍型多样性。在原生和入侵范围的殖民地之间也检测到了微生物组结构的差异,主要由具有潜在氮循环作用的共生体谱系的新型细菌驱动。在每个范围内的各个地点也观察到了共生体组成的可变性。总的来说,这些数据表明, 宿主的微生物组是动态的,这是由于(i)宿主种群中由于奠基者效应导致共生体多样性减少,以及(ii)在范围内的新栖息地中对共生体分类群的环境选择。需要进一步研究来记录这些变化背后的机制,并确定微生物组结构的变化如何与整个共生体的功能和 的全球成功建立相关。非本地物种会破坏沿海生态系统,而微生物共生体可能通过增强宿主的生存和适应性来促进它们的传播。然而,我们对生活在入侵物种内部的微生物知之甚少,也不知道它们是否会随着宿主向新的地区扩散而发生变化。在这项研究中,我们调查了一种引入的海鞘()的微生物群落,并追踪了宿主原生和入侵范围内部的共生体变化。入侵范围内的海鞘微生物组多样性较低,宿主单倍型多样性也较低,这表明特定的殖民地到达新的位置,并从原生种群中携带选择的共生体(即奠基者效应)。此外,入侵范围内的海鞘还拥有不同组成的共生体,包括具有促进入侵成功相关过程潜力的微生物(例如,营养循环)。我们的结论是,这种引入的海鞘微生物组的假定功能和观察到的灵活性可能是新环境中非本地物种成功建立的一个未被充分认识的因素。

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