Department of Natural Products, National Institute of Pharmaceutical Education and Research-Ahmedabad (NIPER-A), An Institute of National Importance, Government of India, Department of Pharmaceuticals, Ministry of Chemicals and Fertilizers, Opp. Airforce Station, Palaj, Gandhinagar, 382355, Gujarat, India.
Appl Biochem Biotechnol. 2021 Mar;193(3):668-686. doi: 10.1007/s12010-020-03423-6. Epub 2020 Nov 2.
Natural products are considered to be the lifeline treatment for several diseases where their structural complexity makes them a source of potential lead molecules. As a producer of antibiotics, food colorants, enzymes, and nutritious food, fungi are beneficial to humans. Fungi, as a source of novel natural products, draw attention of scientists. However, redundant isolation of metabolite retards the rate of discovery. So, apart from the standard conditions for the production of secondary metabolites, certain induction strategies are used to trigger biosynthetic genes in fungi. Advancement in the computational tools helps in connecting gene clusters and their metabolite production. Therefore, modern analytical tools and the genomic era in hand leads to the identification of manifold of cryptic metabolites. The cryptic biosynthetic gene cluster (BGC) has become a treasure hunt for new metabolites representing biosynthetic pathways, regulatory mechanisms, and other factors. This review includes the use of chemical inducers/epigenetic modifiers and co-culture (species interaction) techniques to induce these BGCs. Furthermore, it cites a detailed representation of molecules isolated using these strategies. Since the induction occurs on the genomic molecular DNA and histones, this together brings a significant exploration of the biosynthetic pathways.Graphical Abstract.
天然产物被认为是治疗多种疾病的生命线,其结构复杂性使它们成为潜在的先导分子的来源。真菌作为抗生素、食用色素、酶和营养食品的生产者,对人类有益。真菌作为新型天然产物的来源,引起了科学家的关注。然而,代谢产物的冗余分离阻碍了发现的速度。因此,除了产生次生代谢物的标准条件外,还使用某些诱导策略来触发真菌中的生物合成基因。计算工具的进步有助于连接基因簇及其代谢产物的产生。因此,现代分析工具和基因组时代的到来,使得多种隐匿代谢物得以鉴定。隐匿生物合成基因簇(BGC)已成为寻找新代谢物的宝库,代表着生物合成途径、调控机制和其他因素。本综述包括使用化学诱导剂/表观遗传修饰剂和共培养(物种相互作用)技术来诱导这些 BGC。此外,它还引用了使用这些策略分离的分子的详细表示。由于诱导发生在基因组分子 DNA 和组蛋白上,这共同带来了对生物合成途径的重要探索。