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基于代谢糖基化标记的筛选方法,用于鉴定细菌糖基化基因。

Metabolic Glycan Labeling-Based Screen to Identify Bacterial Glycosylation Genes.

机构信息

Department of Chemistry & Biochemistry, Bowdoin College, 6600 College Station, Brunswick, Maine 04011, United States.

出版信息

ACS Infect Dis. 2020 Dec 11;6(12):3247-3259. doi: 10.1021/acsinfecdis.0c00612. Epub 2020 Nov 13.

Abstract

Bacterial cell surface glycans are quintessential drug targets due to their critical role in colonization of the host, pathogen survival, and immune evasion. The dense cell envelope glycocalyx contains distinctive monosaccharides that are stitched together into higher order glycans to yield exclusively bacterial structures that are critical for strain fitness and pathogenesis. However, the systematic study and inhibition of bacterial glycosylation enzymes remains challenging. Bacteria produce glycans containing rare sugars refractory to traditional glycan analysis, complicating the study of bacterial glycans and the identification of their biosynthesis machinery. To ease the study of bacterial glycans in the absence of detailed structural information, we used metabolic glycan labeling to detect changes in glycan biosynthesis. Here, we screened wild-type versus mutant strains of the gastric pathogen , ultimately permitting the identification of genes involved in glycoprotein and lipopolysaccharide biosynthesis. Our findings provide the first evidence that protein glycosylation proceeds via a lipid carrier-mediated pathway that overlaps with lipopolysaccharide biosynthesis. Protein glycosylation mutants displayed fitness defects consistent with those induced by small molecule glycosylation inhibitors. Broadly, our results suggest a facile approach to screen for bacterial glycosylation genes and gain insight into their biosynthesis and functional importance, even in the absence of glycan structural information.

摘要

细菌细胞表面聚糖是药物靶点的关键,因为它们在宿主定植、病原体存活和免疫逃避方面发挥着关键作用。密集的细胞包膜糖萼包含独特的单糖,这些单糖被缝合在一起形成更高阶的聚糖,从而产生独特的细菌结构,这些结构对菌株适应性和发病机制至关重要。然而,系统地研究和抑制细菌糖基化酶仍然具有挑战性。细菌产生的聚糖含有传统聚糖分析无法识别的稀有糖,这使得细菌聚糖的研究和它们的生物合成机制的鉴定变得复杂。为了在没有详细结构信息的情况下方便地研究细菌聚糖,我们使用代谢糖基化标记来检测糖基化生物合成的变化。在这里,我们筛选了胃病原体的野生型和突变菌株,最终鉴定了参与糖蛋白和脂多糖生物合成的基因。我们的发现提供了第一个证据,表明 蛋白糖基化是通过与脂多糖生物合成重叠的脂质载体介导途径进行的。蛋白糖基化突变体表现出与小分子糖基化抑制剂诱导的适应性缺陷一致。总的来说,我们的结果表明,即使在没有聚糖结构信息的情况下,也可以通过一种简便的方法筛选细菌糖基化基因,并深入了解它们的生物合成和功能重要性。

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