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量子点的细胞毒性:在具有相关性理想指数的可靠模型开发及共识建模中使用准简化分子线性输入规范

Cytotoxicity of quantum dots: Use of quasiSMILES in development of reliable models with index of ideality of correlation and the consensus modelling.

作者信息

Kumar Ashwani, Kumar Parvin

机构信息

Department of Pharmaceutical Sciences, Guru Jambheshwar University of Science and Technology, Hisar, Haryana, 125001, India.

Department of Chemistry, Kurukshetra University, Kurukshetra, Haryana, 136119, India.

出版信息

J Hazard Mater. 2021 Jan 15;402:123777. doi: 10.1016/j.jhazmat.2020.123777. Epub 2020 Aug 25.

Abstract

The assessment of cytotoxicity of quantum dots is very essential for environmental and health risk analysis. In the present work we have modelled HeLa cell cytotoxicity of sixty one CdSe quantum dots with ZnS shell as a function of its experimental conditions and molecular construction using quasiSMILES representations. The index of ideality of correlation helps in the building of ten statistically significant models having good fitting ability with value of R ranging from 0.8414 to 0.9609 for the training set. The split 5 model is rated as the best model with values of R, Q, Q and Q as 0.8964, 0.8267, 0.8264 and 0.8777 respectively for the calibration set. The extraction of features causing increase and decrease of cytotoxicity of quantum dots indicates importance of neutral surface charge, surface modified with protein, 72 h exposure time, combination of MTT assay with surface protein in decreasing the cytotoxicity. Amphiphilic polymer, polyol ligand with neutral charge, 0.5 - 0.6 nm quantum dot diameter with lipid ligand and unmodified positively charged surface are grouped in toxicity enhancer features. Further, consensus modelling using split 5 and 8 patterns enhances the prediction quality by increasing the R to 0.9361 and 0.9656 respectively.

摘要

量子点细胞毒性的评估对于环境和健康风险分析至关重要。在本研究中,我们利用准SMILES表示法,将61种带硫化锌壳的硒化镉量子点的HeLa细胞毒性建模为其实验条件和分子结构的函数。相关性理想指数有助于构建10个具有良好拟合能力的统计显著模型,训练集的R值范围为0.8414至0.9609。拆分5模型被评为最佳模型,校准集的R、Q、Q和Q值分别为0.8964、0.8267、0.8264和0.8777。对导致量子点细胞毒性增加和降低的特征进行提取,表明中性表面电荷、蛋白质修饰表面、72小时暴露时间、MTT测定与表面蛋白结合在降低细胞毒性方面的重要性。两亲聚合物、带中性电荷的多元醇配体、带脂质配体且直径为0.5 - 0.6纳米的量子点以及未修饰的带正电荷表面被归类为毒性增强特征。此外,使用拆分5和8模式的共识建模分别将R提高到0.9361和0.9656,从而提高了预测质量。

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