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评估神经编码中特定反应特征的相关性。

Assessing the Relevance of Specific Response Features in the Neural Code.

作者信息

Eyherabide Hugo Gabriel, Samengo Inés

机构信息

Department of Computer Science and Helsinki Institute for Information Technology, University of Helsinki Gustaf Hällströmin katu 2b, FI00560 Helsinki, Finland.

Department of Medical Physics, Centro Atómico Bariloche and Instituto Balseiro, 8400 San Carlos de Bariloche, Argentina.

出版信息

Entropy (Basel). 2018 Nov 15;20(11):879. doi: 10.3390/e20110879.

Abstract

The study of the neural code aims at deciphering how the nervous system maps external stimuli into neural activity-the encoding phase-and subsequently transforms such activity into adequate responses to the original stimuli-the decoding phase. Several information-theoretical methods have been proposed to assess the relevance of individual response features, as for example, the spike count of a given neuron, or the amount of correlation in the activity of two cells. These methods work under the premise that the relevance of a feature is reflected in the information loss that is induced by eliminating the feature from the response. The alternative methods differ in the procedure by which the tested feature is removed, and the algorithm with which the lost information is calculated. Here we compare these methods, and show that more often than not, each method assigns a different relevance to the tested feature. We demonstrate that the differences are both quantitative and qualitative, and connect them with the method employed to remove the tested feature, as well as the procedure to calculate the lost information. By studying a collection of carefully designed examples, and working on analytic derivations, we identify the conditions under which the relevance of features diagnosed by different methods can be ranked, or sometimes even equated. The condition for equality involves both the amount and the type of information contributed by the tested feature. We conclude that the quest for relevant response features is more delicate than previously thought, and may yield to multiple answers depending on methodological subtleties.

摘要

神经编码研究旨在破译神经系统如何将外部刺激映射为神经活动(编码阶段),并随后将这种活动转化为对原始刺激的适当反应(解码阶段)。已经提出了几种信息论方法来评估个体反应特征的相关性,例如给定神经元的尖峰计数,或两个细胞活动中的相关程度。这些方法的前提是,特征的相关性反映在通过从反应中消除该特征而导致的信息损失中。替代方法在去除测试特征的过程以及计算损失信息的算法上有所不同。在这里,我们比较了这些方法,并表明通常每种方法对测试特征赋予不同的相关性。我们证明这些差异既有定量的也有定性的,并将它们与用于去除测试特征的方法以及计算损失信息的过程联系起来。通过研究一系列精心设计的示例并进行解析推导验证,我们确定了不同方法诊断出的特征相关性可以排序甚至有时相等的条件。相等的条件涉及测试特征贡献的信息数量和类型。我们得出结论,寻找相关反应特征比以前认为的更为微妙,并且可能会因方法上的细微差别而产生多种答案。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/17b3/7512461/47853691b978/entropy-20-00879-g001.jpg

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