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基于全苗的拟南芥化学遗传筛选。

Whole-Seedling-Based Chemical Genetic Screens in Arabidopsis.

机构信息

Department of Microbial Pathogenesis, Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT, USA.

Yale Systems Biology Institute, Yale University, West Haven, CT, USA.

出版信息

Methods Mol Biol. 2021;2213:29-37. doi: 10.1007/978-1-0716-0954-5_3.

DOI:10.1007/978-1-0716-0954-5_3
PMID:33270190
Abstract

Forward genetics has been extremely powerful for dissecting biological pathways in various model organisms. However, it is limited by the fact that redundant gene families and essential genes cannot be readily uncovered through such methods. Chemical genetics, on the other hand, provides a valuable complementary approach to probe biological processes and is suitable for not only genetic model organisms but also genetically less tractable species. We describe here a high-throughput chemical genetic screening method simply based on plant growth and developmental phenotypes in Arabidopsis. It was successfully utilized to study plant immunity and can be easily adapted for dissecting other plant signal transduction pathways.

摘要

正向遗传学在解析各种模式生物的生物途径方面非常强大。然而,它受到冗余基因家族和必需基因无法通过这种方法轻易揭示的事实的限制。另一方面,化学遗传学为探究生物过程提供了一种有价值的互补方法,不仅适用于遗传模式生物,也适用于遗传上较难处理的物种。我们在这里描述了一种基于拟南芥生长和发育表型的高通量化学遗传筛选方法。它已成功用于研究植物免疫,并且可以很容易地适应于解析其他植物信号转导途径。

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1
Whole-Seedling-Based Chemical Genetic Screens in Arabidopsis.基于全苗的拟南芥化学遗传筛选。
Methods Mol Biol. 2021;2213:29-37. doi: 10.1007/978-1-0716-0954-5_3.
2
Chemical Genetics to Uncover Mechanisms Underlying Lipid-Mediated Signaling Events in Plants.化学生物学揭示植物脂类介导的信号事件中的作用机制。
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Chemical genetic screens using Arabidopsis thaliana seedlings grown on solid medium.使用在固体培养基上生长的拟南芥幼苗进行化学遗传学筛选。
Methods Mol Biol. 2015;1263:111-25. doi: 10.1007/978-1-4939-2269-7_9.
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High-throughput screening of small-molecule libraries for inducers of plant defense responses.高通量筛选小分子文库以寻找植物防御反应诱导剂。
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Method for Phenotypic Chemical Screening to Identify Cryptochrome Inhibitors.表型化学筛选鉴定隐花色素抑制剂的方法
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Forward chemical genetic screens in Arabidopsis identify genes that influence sensitivity to the phytotoxic compound sulfamethoxazole.在拟南芥中进行正向化学遗传学筛选,以鉴定影响对植物毒性化合物磺胺甲恶唑敏感性的基因。
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