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多年冻土融化演替过程中细菌群落组装从随机到确定性的转变

The Transition From Stochastic to Deterministic Bacterial Community Assembly During Permafrost Thaw Succession.

作者信息

Doherty Stacey Jarvis, Barbato Robyn A, Grandy A Stuart, Thomas W Kelley, Monteux Sylvain, Dorrepaal Ellen, Johansson Margareta, Ernakovich Jessica G

机构信息

Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, United States.

Cold Regions Research and Engineering Laboratory, Engineer Research Development Center, United States Army Corps of Engineers, Hanover, NH, United States.

出版信息

Front Microbiol. 2020 Nov 13;11:596589. doi: 10.3389/fmicb.2020.596589. eCollection 2020.

Abstract

The Northern high latitudes are warming twice as fast as the global average, and permafrost has become vulnerable to thaw. Changes to the environment during thaw leads to shifts in microbial communities and their associated functions, such as greenhouse gas emissions. Understanding the ecological processes that structure the identity and abundance (i.e., assembly) of pre- and post-thaw communities may improve predictions of the functional outcomes of permafrost thaw. We characterized microbial community assembly during permafrost thaw using observations and a laboratory incubation of soils from the Storflaket Mire in Abisko, Sweden, where permafrost thaw has occurred over the past decade. observations indicated that bacterial community assembly was driven by randomness (i.e., stochastic processes) immediately after thaw with drift and dispersal limitation being the dominant processes. As post-thaw succession progressed, environmentally driven (i.e., deterministic) processes became increasingly important in structuring microbial communities where homogenizing selection was the only process structuring upper active layer soils. Furthermore, laboratory-induced thaw reflected assembly dynamics immediately after thaw indicated by an increase in drift, but did not capture the long-term effects of permafrost thaw on microbial community dynamics. Our results did not reflect a link between assembly dynamics and carbon emissions, likely because respiration is the product of many processes in microbial communities. Identification of dominant microbial community assembly processes has the potential to improve our understanding of the ecological impact of permafrost thaw and the permafrost-climate feedback.

摘要

北半球高纬度地区的变暖速度是全球平均速度的两倍,永久冻土已变得易于融化。融化过程中的环境变化导致微生物群落及其相关功能发生转变,如温室气体排放。了解构成融化前后群落特征和丰度(即组装)的生态过程,可能会改进对永久冻土融化功能结果的预测。我们利用观测数据以及对瑞典阿比斯库斯托尔弗拉凯特沼泽土壤进行的实验室培养,对永久冻土融化过程中的微生物群落组装进行了表征,在过去十年里,该地区发生了永久冻土融化。观测表明,融化后立即随机过程(即随机过程)驱动细菌群落组装,其中漂移和扩散限制是主要过程。随着融化后演替的推进,环境驱动(即确定性)过程在构建微生物群落中变得越来越重要,其中同质化选择是构建上层活跃层土壤的唯一过程。此外,实验室诱导的融化反映了融化后立即出现的组装动态,表现为漂移增加,但没有捕捉到永久冻土融化对微生物群落动态的长期影响。我们的结果没有反映出组装动态与碳排放之间的联系,可能是因为呼吸作用是微生物群落中许多过程的产物。确定主要的微生物群落组装过程有可能增进我们对永久冻土融化的生态影响以及永久冻土 - 气候反馈的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b9a4/7691490/1a1c5ec44372/fmicb-11-596589-g001.jpg

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