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有限规模种群中的多基因适应

Polygenic Adaptation in a Population of Finite Size.

作者信息

Stephan Wolfgang, John Sona

机构信息

Leibniz Institute for Evolution and Biodiversity Science, Natural History Museum, 10115 Berlin, Germany.

Department of Life Science Systems, Technical University of Munich, 85354 Freising, Germany.

出版信息

Entropy (Basel). 2020 Aug 18;22(8):907. doi: 10.3390/e22080907.

Abstract

Polygenic adaptation in response to selection on quantitative traits has become an important topic in evolutionary biology. Here we review the recent literature on models of polygenic adaptation. In particular, we focus on a model that includes mutation and both directional and stabilizing selection on a highly polygenic trait in a population of finite size (thus experiencing random genetic drift). Assuming that a sudden environmental shift of the fitness optimum occurs while the population is in a stochastic equilibrium, we analyze the adaptation of the trait to the new optimum. When the shift is not too large relative to the equilibrium genetic variance and this variance is determined by loci with mostly small effects, the approach of the mean phenotype to the optimum can be approximated by a rapid exponential process (whose rate is proportional to the genetic variance). During this rapid phase the underlying changes to allele frequencies, however, may depend strongly on genetic drift. While trait-increasing alleles with intermediate equilibrium frequencies are dominated by selection and contribute positively to changes of the trait mean (i.e., are aligned with the direction of the optimum shift), alleles with low or high equilibrium frequencies show more of a random dynamics, which is expected when drift is dominating. A strong effect of drift is also predicted for population size bottlenecks. Our simulations show that the presence of a bottleneck results in a larger deviation of the population mean of the trait from the fitness optimum, which suggests that more loci experience the influence of drift.

摘要

响应数量性状选择的多基因适应已成为进化生物学中的一个重要课题。在此,我们综述了近期关于多基因适应模型的文献。特别地,我们聚焦于一个模型,该模型包含突变以及在有限大小种群(因此经历随机遗传漂变)中对高度多基因性状的定向选择和稳定选择。假设在种群处于随机平衡时突然发生适应度最优值的环境转变,我们分析该性状对新最优值的适应情况。当转变相对于平衡遗传方差不是太大且该方差由大多具有小效应的位点决定时,平均表型向最优值的趋近可由一个快速指数过程近似(其速率与遗传方差成正比)。然而,在这个快速阶段,等位基因频率的潜在变化可能强烈依赖于遗传漂变。虽然具有中等平衡频率的增加性状的等位基因受选择主导并对性状均值的变化有正向贡献(即与最优值转变方向一致),但具有低或高平衡频率的等位基因表现出更多的随机动态,这在漂变占主导时是预期的。对于种群大小瓶颈,也预测有强烈的漂变效应。我们的模拟表明瓶颈的存在导致性状的种群均值与适应度最优值有更大偏差,这表明更多位点受到漂变的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/537a/7517530/e37577085069/entropy-22-00907-g001.jpg

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