• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

磷酸丝氨酸抑制组蛋白 H3 的 RKS 基序中相邻精氨酸的甲基化。

Phosphoserine inhibits neighboring arginine methylation in the RKS motif of histone H3.

机构信息

Department of Chemistry and Biochemistry, California State University, Los Angeles, 5151 State University Drive, Los Angeles, 90033, CA, USA.

Department of Physics and Astronomy, California State University, Los Angeles, 5151 State University Drive, Los Angeles, 90033, CA, USA.

出版信息

Arch Biochem Biophys. 2021 Feb 15;698:108716. doi: 10.1016/j.abb.2020.108716. Epub 2020 Dec 10.

DOI:10.1016/j.abb.2020.108716
PMID:33309545
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11028399/
Abstract

The effects of phosphorylation of histone H3 at serine 10 have been studied in the context of other posttranslational modifications such as lysine methylation. We set out to investigate the impact of phosphoserine-10 on arginine-8 methylation. We performed methylation reactions using peptides based on histone H3 that contain a phosphorylated serine and compared the extent of arginine methylation with unmodified peptides. Results obtained via fluorography indicate that peptides containing a phosphorylated serine-10 inhibit deposition of methyl groups to arginine-8 residues. To further explore the effects of phosphoserine on neighboring arginine residues, we physically characterized the non-covalent interactions between histone H3 phosphoserine-10 and arginine-8 using P NMR spectroscopy. A salt bridge was detected between the negatively charged phosphoserine-10 and the positively charged unmodified arginine-8 residue. This salt bridge was not detected when arginine-8 was symmetrically dimethylated. Finally, molecular simulations not only confirm the presence of a salt bridge but also identify a subset of electrostatic interactions present when arginine is replaced with alanine. Taken together, our work suggests that the negatively charged phosphoserine maximizes its interactions. By limiting its exposure and creating new contacts with neighboring residues, it will inhibit deposition of neighboring methyl groups, not through steric hindrance, but by forming intrapeptide interactions that may mask substrate recognition. Our work provides a mechanistic framework for understanding the role of phosphoserine on nearby amino acid residues and arginine methylation.

摘要

组蛋白 H3 丝氨酸 10 位磷酸化的影响已经在其他翻译后修饰(如赖氨酸甲基化)的背景下进行了研究。我们着手研究磷酸丝氨酸-10 对精氨酸-8 甲基化的影响。我们使用含有磷酸丝氨酸的组蛋白 H3 肽进行甲基化反应,并将精氨酸甲基化的程度与未修饰的肽进行比较。荧光成像结果表明,含有磷酸丝氨酸-10 的肽抑制了精氨酸-8 残基上甲基的沉积。为了进一步探讨磷酸丝氨酸对邻近精氨酸残基的影响,我们使用 P NMR 光谱学对组蛋白 H3 磷酸丝氨酸-10 和精氨酸-8 之间的非共价相互作用进行了物理表征。在带负电荷的磷酸丝氨酸-10 和带正电荷的未修饰的精氨酸-8 残基之间检测到盐桥。当精氨酸-8 被对称二甲基化时,未检测到盐桥。最后,分子模拟不仅证实了盐桥的存在,还确定了当精氨酸被丙氨酸取代时存在的一组静电相互作用。总之,我们的工作表明,带负电荷的磷酸丝氨酸最大限度地发挥其相互作用。通过限制其暴露并与邻近残基形成新的接触,它将抑制邻近甲基的沉积,不是通过空间位阻,而是通过形成可能掩盖底物识别的肽内相互作用。我们的工作为理解磷酸丝氨酸对附近氨基酸残基和精氨酸甲基化的作用提供了一个机制框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/0b700ab6b748/nihms-1963027-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/31c58b89ca48/nihms-1963027-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/151433537da1/nihms-1963027-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/2948314d0e40/nihms-1963027-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/0b700ab6b748/nihms-1963027-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/31c58b89ca48/nihms-1963027-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/151433537da1/nihms-1963027-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/2948314d0e40/nihms-1963027-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848e/11028399/0b700ab6b748/nihms-1963027-f0004.jpg

相似文献

1
Phosphoserine inhibits neighboring arginine methylation in the RKS motif of histone H3.磷酸丝氨酸抑制组蛋白 H3 的 RKS 基序中相邻精氨酸的甲基化。
Arch Biochem Biophys. 2021 Feb 15;698:108716. doi: 10.1016/j.abb.2020.108716. Epub 2020 Dec 10.
2
Structural role of RKS motifs in chromatin interactions: a molecular dynamics study of HP1 bound to a variably modified histone tail.RKS 基序在染色质相互作用中的结构作用:HP1 结合到可变修饰组蛋白尾部的分子动力学研究。
Biophys J. 2012 Apr 18;102(8):1926-33. doi: 10.1016/j.bpj.2012.03.030.
3
The macromolecular complexes of histones affect protein arginine methyltransferase activities.组蛋白的大分子复合物会影响蛋白质精氨酸甲基转移酶的活性。
J Biol Chem. 2021 Oct;297(4):101123. doi: 10.1016/j.jbc.2021.101123. Epub 2021 Sep 6.
4
Effects of substrate modifications on the arginine dimethylation activities of PRMT1 and PRMT5.基质修饰对 PRMT1 和 PRMT5 的精氨酸二甲基化活性的影响。
Epigenetics. 2022 Jan;17(1):1-18. doi: 10.1080/15592294.2020.1864170. Epub 2020 Dec 31.
5
Sequence specificity and role of proximal amino acids of the histone H3 tail on catalysis of murine G9A lysine 9 histone H3 methyltransferase.组蛋白H3尾巴近端氨基酸对小鼠G9A赖氨酸9组蛋白H3甲基转移酶催化作用的序列特异性及作用
Biochemistry. 2005 Oct 4;44(39):12998-3006. doi: 10.1021/bi0509907.
6
Mammalian protein arginine methyltransferase 7 (PRMT7) specifically targets RXR sites in lysine- and arginine-rich regions.哺乳动物蛋白精氨酸甲基转移酶 7(PRMT7)特异性地靶向富含赖氨酸和精氨酸的区域中的 RXR 位点。
J Biol Chem. 2013 Dec 27;288(52):37010-25. doi: 10.1074/jbc.M113.525345. Epub 2013 Nov 18.
7
Investigating the Influence of Arginine Dimethylation on Nucleosome Dynamics Using All-Atom Simulations and Kinetic Analysis.运用全原子模拟和动力学分析研究精氨酸二甲基化对核小体动力学的影响。
J Phys Chem B. 2018 Oct 25;122(42):9625-9634. doi: 10.1021/acs.jpcb.8b05067. Epub 2018 Oct 10.
8
Readers of histone methylarginine marks.组蛋白甲基精氨酸标记的读者。
Biochim Biophys Acta. 2014 Aug;1839(8):702-10. doi: 10.1016/j.bbagrm.2014.02.015. Epub 2014 Feb 28.
9
Intricate Effects of α-Amino and Lysine Modifications on Arginine Methylation of the N-Terminal Tail of Histone H4.α-氨基和赖氨酸修饰对组蛋白H4 N端尾巴精氨酸甲基化的复杂影响
Biochemistry. 2017 Jul 18;56(28):3539-3548. doi: 10.1021/acs.biochem.7b00450. Epub 2017 Jul 7.
10
Phosphorylation of serine 10 in histone H3 is functionally linked in vitro and in vivo to Gcn5-mediated acetylation at lysine 14.组蛋白H3中丝氨酸10的磷酸化在体外和体内都与Gcn5介导的赖氨酸14乙酰化功能相关。
Mol Cell. 2000 Jun;5(6):917-26. doi: 10.1016/s1097-2765(00)80257-9.

引用本文的文献

1
The Role of Histone Modification in DNA Replication-Coupled Nucleosome Assembly and Cancer.组蛋白修饰在 DNA 复制偶联核小体组装和癌症中的作用。
Int J Mol Sci. 2023 Mar 3;24(5):4939. doi: 10.3390/ijms24054939.

本文引用的文献

1
Development and Validation of AMBER-FB15-Compatible Force Field Parameters for Phosphorylated Amino Acids.发展和验证适用于磷酸化氨基酸的 AMBER-FB15 相容力场参数。
J Phys Chem B. 2021 Nov 4;125(43):11927-11942. doi: 10.1021/acs.jpcb.1c07547. Epub 2021 Oct 20.
2
An Integrated Approach for Combinatorial Readout of Dual Histone Modifications by Epigenetic Tandem Domains.通过表观遗传串联结构域对双重组蛋白修饰进行组合读出的综合方法。
Anal Chem. 2020 May 5;92(9):6218-6223. doi: 10.1021/acs.analchem.9b05394. Epub 2020 Apr 14.
3
Visualization of the dynamics of histone modifications and their crosstalk using PTM-CrossTalkMapper.
使用 PTM-CrossTalkMapper 可视化组蛋白修饰及其相互作用的动态变化。
Methods. 2020 Dec 1;184:78-85. doi: 10.1016/j.ymeth.2020.01.012. Epub 2020 Jan 21.
4
Crosstalk of Phosphorylation and Arginine Methylation in Disordered SRGG Repeats of Saccharomycescerevisiae Fibrillarin and Its Association with Nucleolar Localization.磷酸化和精氨酸甲基化在酿酒酵母核仁蛋白 Fibrillarin 的无序 SRGG 重复序列中的串扰及其与核仁定位的关联。
J Mol Biol. 2020 Jan 17;432(2):448-466. doi: 10.1016/j.jmb.2019.11.006. Epub 2019 Nov 20.
5
Zebrafish arginine methyltransferase is essential for germ cell development.斑马鱼精氨酸甲基转移酶对于生殖细胞的发育是必不可少的。
Development. 2019 Oct 14;146(20):dev179572. doi: 10.1242/dev.179572.
6
Phosphorylation of Serine Induces Lysine p K Increases in Histone N-Termini and Signaling for Acetylation. Transcription Implications.丝氨酸磷酸化诱导组蛋白N端赖氨酸pK值升高及乙酰化信号转导。转录意义。
Biochemistry. 2018 Dec 18;57(50):6816-6821. doi: 10.1021/acs.biochem.8b01040. Epub 2018 Dec 5.
7
PRMT2 links histone H3R8 asymmetric dimethylation to oncogenic activation and tumorigenesis of glioblastoma.PRMT2 将组蛋白 H3R8 不对称二甲基化与胶质母细胞瘤的致癌激活和肿瘤发生联系起来。
Nat Commun. 2018 Oct 31;9(1):4552. doi: 10.1038/s41467-018-06968-7.
8
Conserved salt-bridge competition triggered by phosphorylation regulates the protein interactome.磷酸化触发的保守盐桥竞争调节蛋白质相互作用组。
Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13453-13458. doi: 10.1073/pnas.1711543114. Epub 2017 Dec 5.
9
Epigenetic control via allosteric regulation of mammalian protein arginine methyltransferases.通过变构调节哺乳动物蛋白精氨酸甲基转移酶进行表观遗传控制。
Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):10101-10106. doi: 10.1073/pnas.1706978114. Epub 2017 Sep 5.
10
Building a More Predictive Protein Force Field: A Systematic and Reproducible Route to AMBER-FB15.构建更具预测性的蛋白质力场:通往AMBER-FB15的系统且可重复的途径。
J Phys Chem B. 2017 Apr 27;121(16):4023-4039. doi: 10.1021/acs.jpcb.7b02320. Epub 2017 Apr 6.