Wang Jun-Fu, Wang Ye, Zhang Si-Wen, Chen Ye-Yang, Qiu Yue, Duan Shao-Yi, Li Bo-Pei, Chen Jun-Qiang
Department of Gastrointestinal Surgery, The First Affiliated Hospital of Guangxi Medical University, 6 Shuangyong Road, Nanning 530021, Guangxi Zhuang Autonomous Region, China.
J Oncol. 2020 Nov 30;2020:8862228. doi: 10.1155/2020/8862228. eCollection 2020.
Integrins are involved in the biological process of a variety of cancers, but their importance in the diagnosis and prognosis of gastric cancer (GC) is still unclear. Therefore, this study aimed at exploring the significance of ITG gene expression in GC to evaluate its diagnosis and prognosis.
GEPIA data were used to evaluate the mRNA expression of ITG genes in GC patients. The prognostic value of these genes was assessed by analyzing their mRNA expression using the Kaplan-Meier curve. The biological function of ITG genes was evaluated by GC tissue sequencing combined with GSEA bioinformatics. Based on the sequencing data, ITGA5 with the largest expression difference was selected for verification, and RT-PCR was used to verify its mRNA expression level in 40 pairs of GC and normal tissues.
ITG (A2, A3, A4, A5, A6, A11, AE, AL, AM, AV, AX, B1, B2, B4, B5, B6, and B8) was highly expressed in GC tissues, while ITGA8 was low, compared with their expression in normal tissues. RNA-seq data shows that ITG (A2, A5, A11, AV, and B1) expression was associated with poor prognosis and overall survival. In addition, combined with the results of GC tissue mRNA sequencing, it was further found that the differentially expressed genes in the ITGs genes. ITGA5 was highly expressed in GC tissues compared with its expression in normal tissues, as evaluated by qRT-PCR ( < 0.001) and ROC ( < 0.001, AUC (95% CI) = 0.747 (0.641-0.851)), and confirmed that ITGA5 expression was a potential diagnostic marker for GC. Bioinformatics analysis revealed that the signaling pathway involved in ITGA5 was mainly enriched in focal adhesion, ECM-receptor interaction, and PI3K-AKT and was mainly involved in biological processes such as cell adhesion, extracellular matrix, and cell migration.
This study suggested that ITGs were associated with the diagnosis and prognosis of GC and discovered the prognostic value and biological role of ITGA5 in GC. Thus, ITGA5 might be used as a potential diagnostic marker for GC.
整合素参与多种癌症的生物学过程,但其在胃癌(GC)诊断和预后中的重要性仍不明确。因此,本研究旨在探讨ITG基因表达在GC中的意义,以评估其诊断和预后价值。
利用GEPIA数据评估GC患者中ITG基因的mRNA表达。通过使用Kaplan-Meier曲线分析这些基因的mRNA表达来评估其预后价值。通过GC组织测序结合GSEA生物信息学评估ITG基因的生物学功能。基于测序数据,选择表达差异最大的ITGA5进行验证,并使用RT-PCR验证其在40对GC组织和正常组织中的mRNA表达水平。
与正常组织中的表达相比,ITG(A2、A3、A4、A5、A6、A11、AE、AL、AM、AV、AX、B1、B2、B4、B5、B6和B8)在GC组织中高表达,而ITGA8低表达。RNA测序数据显示,ITG(A2、A5、A11、AV和B1)的表达与不良预后和总生存期相关。此外,结合GC组织mRNA测序结果,进一步发现ITGs基因中的差异表达基因。通过qRT-PCR(<0.001)和ROC(<0.001,AUC(95%CI)=0.747(0.641-0.851))评估,与正常组织相比,ITGA5在GC组织中高表达,并证实ITGA5表达是GC的潜在诊断标志物。生物信息学分析显示,ITGA5涉及的信号通路主要富集于粘着斑、ECM-受体相互作用以及PI3K-AKT,并且主要参与细胞粘附、细胞外基质和细胞迁移等生物学过程。
本研究表明ITGs与GC的诊断和预后相关,并发现了ITGA5在GC中的预后价值和生物学作用。因此,ITGA5可能用作GC的潜在诊断标志物。