ElBaradei Amira, Maharem Dalia Ali, Kader Ola, Ghareeb Mustafa Kareem, Naga Iman S
Department of Microbiology and Immunology, Faculty of Pharmacy, Pharos University in Alexandria, Alexandria, Egypt.
Alexandria University Hospital, Alexandria University, Alexandria, Egypt.
AIMS Microbiol. 2020 Nov 3;6(4):422-433. doi: 10.3934/microbiol.2020025. eCollection 2020.
Commensal ESBL-producing represent a reservoir for resistance genes therefore, their detection is crucial to restrain the spread of beta-lactam resistance. Hence, the aim of the present study was phenotypic and genotypic characterization of commensal ESBL-producing obtained from the stool of patients at the time of admission and at the time of discharge from the Medical Research Institute hospital. A total of 70 isolates were collected from 35 patients and were categorized into Group A (samples obtained on admission) and Group B (samples obtained at the time of discharge). Phenotypically, 30 isolates were ESBL producers (40% of isolates collected on admission and 45.7% of the strains obtained at the time of discharge were ESBL producers). Most of them harbored one to three plasmids with sizes ranging from one kbp to ten kbp. Upon genotypic investigation, was the most detected gene in 80% of ESBL strains, followed by in 53.3% and the least detected was in only 13.3%. By comparing group A and group B, ten patients were found to carry commensal ESBL-producing , in two patients these isolates carried ESBL genes that were identical on admission and on discharge. However, in eight patients, these isolates carried different ESBL genes, which were newly harbored during hospital stay. The high abundance of MDR commensal 48.57% together with the presence of 42.86% ESBL-producing commensal among our isolates represents an alarming threat, as they are frequently associated with the increased risk of infection, higher costs and longer hospital stay.
产超广谱β-内酰胺酶(ESBL)的共生菌是耐药基因的储存库,因此,对它们的检测对于抑制β-内酰胺耐药性的传播至关重要。因此,本研究的目的是对从医学研究所医院患者入院时和出院时粪便中分离出的产ESBL共生菌进行表型和基因型特征分析。共从35例患者中收集了70株分离株,并分为A组(入院时获得的样本)和B组(出院时获得的样本)。表型上,30株分离株为ESBL产生菌(入院时收集的分离株中有40%,出院时获得的菌株中有45.7%为ESBL产生菌)。它们中的大多数携带1至3个质粒,大小从1千碱基对到10千碱基对不等。在基因型调查中,80%的ESBL菌株中最常检测到的基因是 ,其次是53.3%的 ,最少检测到的是仅13.3%的 。通过比较A组和B组,发现10例患者携带产ESBL的共生菌,其中2例患者这些分离株携带入院时和出院时相同的ESBL基因。然而,在8例患者中,这些分离株携带不同的ESBL基因,这些基因是在住院期间新获得的。我们分离株中48.57%的多重耐药共生菌的高丰度以及42.86%的产ESBL共生菌的存在代表了一个令人担忧的威胁,因为它们经常与感染风险增加、成本更高和住院时间延长相关。