• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

中国南方特有草本植物母草(母草科)的完整质体基因组序列

Complete plastome sequence of Hance (Linderniaceae), an endemic herb in South China.

作者信息

Cheng Xia-Lan, Liu Yi-Ming, Wang Hong-Xin, Li Hai-Li, Chen Yan, Wang Li-Yun

机构信息

School of Life Science and Technology, Lingnan Normal University, Zhanjiang, Guangdong, China.

Administrative Bureau of Guangdong, Zhanjiang Mangrove National Nature Reserve, Zhanjiang, Guangdong, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 10;4(2):2092-2093. doi: 10.1080/23802359.2019.1618220.

DOI:10.1080/23802359.2019.1618220
PMID:33365422
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687608/
Abstract

Hance is an endemic plant species distributed in southern China. In this study, we report and characterize the complete plastid genome sequence of in order to provide genomic resources helpful for promoting its conservation and garden utilization. The complete plastome is 153,526 bp in length and contains the typical quadripartite structure of angiosperm plastome, including two inverted repeat (IR) regions of 24,638 bp, a large single-copy (LSC) region of 85,417 bp, and a small single-copy (SSC) region of 18,833 bp. The plastome contains 114 genes, consisting of 80 unique protein-coding genes, 30 unique tRNA gene, and 4 unique rRNA genes. The overall A/T content in the plastome of is 62.40%. The complete plastome sequence of will provide a useful resource for the conservation and garden utilization of this species as well as for the phylogenetic studies of Linderniaceae.

摘要

母草是一种分布于中国南方的特有植物物种。在本研究中,我们报道并描述了母草的完整叶绿体基因组序列,以便提供有助于促进其保护和园林利用的基因组资源。完整的叶绿体基因组长度为153,526 bp,具有被子植物叶绿体基因组典型的四分体结构,包括两个24,638 bp的反向重复(IR)区域、一个85,417 bp的大单拷贝(LSC)区域和一个18,833 bp的小单拷贝(SSC)区域。叶绿体基因组包含114个基因,由80个独特的蛋白质编码基因、30个独特的tRNA基因和4个独特的rRNA基因组成。母草叶绿体基因组的总体A/T含量为62.40%。母草的完整叶绿体基因组序列将为该物种的保护和园林利用以及母草科的系统发育研究提供有用的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f190/7687608/301ff9431cdc/TMDN_A_1618220_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f190/7687608/301ff9431cdc/TMDN_A_1618220_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f190/7687608/301ff9431cdc/TMDN_A_1618220_F0001_B.jpg

相似文献

1
Complete plastome sequence of Hance (Linderniaceae), an endemic herb in South China.中国南方特有草本植物母草(母草科)的完整质体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 10;4(2):2092-2093. doi: 10.1080/23802359.2019.1618220.
2
Complete plastome sequence of var. (dandy) Noot. (Magnoliaceae), an endemic and ornamental tree in South China.华南地区特有观赏树种小花木兰(木兰科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Dec 13;5(1):206-207. doi: 10.1080/23802359.2019.1699456.
3
Complete plastome sequence of C.Y. Wu & H.S. Lo (Acanthaceae): a medicinal plant in South China.吴征镒和罗献瑞(爵床科)的完整质体基因组序列:一种中国南方的药用植物。
Mitochondrial DNA B Resour. 2020 Aug 25;5(3):3197-3198. doi: 10.1080/23802359.2020.1810158.
4
Complete plastome sequence of (Piperaceae): An endemic plant species in South China.胡椒科(Piperaceae)植物的完整质体基因组序列:中国南方的一种特有植物物种。
Mitochondrial DNA B Resour. 2018 Oct 27;3(2):1035-1036. doi: 10.1080/23802359.2018.1511850.
5
Complete plastome sequence of var. (Y.S.Wu & S.C.Chen) S.C.Chen & Z.J.Liu (Orchidaceae): an endangered (EN) plant species in Southwest China.(吴应祥 & 陈心启)陈心启 & 刘仲健的全叶绿体基因组序列(兰科):中国西南地区的一种濒危(EN)植物物种。
Mitochondrial DNA B Resour. 2020 Aug 17;5(3):3180-3181. doi: 10.1080/23802359.2020.1810157.
6
Complete plastome sequence of Lindley (Linderniaceae): an ornamental herb.母草属(母草科)一种观赏草本植物的完整质体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2312-2313. doi: 10.1080/23802359.2019.1627949.
7
Complete plastome sequence of linn. (Dilleniaceae): an Endangered (EN) species in South China.莲(莲科)的完整质体基因组序列:中国南方的一种濒危(EN)物种。
Mitochondrial DNA B Resour. 2018 Nov 25;4(1):55-56. doi: 10.1080/23802359.2018.1536454. eCollection 2019.
8
Complete plastome sequence of (Styracaeae): An endangered (EN) plant species endemic to China.安息香科(Styracaeae)植物的完整质体基因组序列:一种中国特有的濒危(EN)植物物种。
Mitochondrial DNA B Resour. 2018 Oct 27;3(2):1031-1032. doi: 10.1080/23802359.2018.1511847.
9
Complete plastome sequence of (Rutaceae): an endemic "near threatened" shrub in South China.(芸香科)的完整质体基因组序列:中国南方一种地方性“近危”灌木。
Mitochondrial DNA B Resour. 2018 Jul 3;3(2):730-731. doi: 10.1080/23802359.2018.1483764.
10
Complete plastome sequence of (Nepenthaceae): a "vulnerable" herb in China.(猪笼草科)的完整质体基因组序列:中国一种“易危”草本植物
Mitochondrial DNA B Resour. 2018 Jul 3;3(2):732-733. doi: 10.1080/23802359.2018.1483765.

引用本文的文献

1
The complete chloroplast genome of (Azaola) Pennell 1943 (Linderniaceae).1943年彭内尔所描述的(水蓑衣属)(母草科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2023 Oct 30;8(11):1145-1148. doi: 10.1080/23802359.2023.2274619. eCollection 2023.
2
Complete chloroplast genome sequence of an important medicinal plant.一种重要药用植物的叶绿体基因组全序列
Mitochondrial DNA B Resour. 2020 Jan 16;5(1):652-653. doi: 10.1080/23802359.2019.1711230.

本文引用的文献

1
The complete genome of cv. dongzao, an economic crop in Yellow River Delta of China.中国黄河三角洲经济作物冬枣的全基因组。
Mitochondrial DNA B Resour. 2017 Sep 29;2(2):692-693. doi: 10.1080/23802359.2017.1383206.
2
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
3
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.
RAxML-VI-HPC:基于最大似然法的系统发育分析,适用于数千个分类单元及混合模型。
Bioinformatics. 2006 Nov 1;22(21):2688-90. doi: 10.1093/bioinformatics/btl446. Epub 2006 Aug 23.
4
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.