Zhu Zhi-Xin, Wang Jian-Hua, Chen Chao-Rui, Zhao Kun-Kun, Wang Hua-Feng
Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, China.
Mitochondrial DNA B Resour. 2018 Jul 3;3(2):732-733. doi: 10.1080/23802359.2018.1483765.
(Nepenthaceae) is an erect or climbing (0.5-2 m tall) herb distributed in Africa (Madagascar), south and southeast Asia, North Australia and Pacific Islands (Caroline Islands). There is only one species in China. It grows in wet and sandy soils places throughout forests, grasslands, swamps, mountains, roadsides, wastelands having altitudes that sea level to 400 m. It has been ranked as a VU (Vulnerable) species in China. Here we report and characterize the complete plastid genome sequence of in an effort to provide genomic resources useful for its conservation. The complete plastome is 155,755 bp in length and contains the typical structure and gene content of angiosperm plastomes, including two Inverted Repeat (IR) regions of 26,415 bp, a Large Single-Copy (LSC) region of 84,997 bp and a Small Single-Copy (SSC) region of 17,928 bp. The plastome contains 113 genes, consisting of 77 unique protein-coding genes, three pseudogenes, 29 unique tRNA genes, and four unique rRNA genes. The overall A/T content in the plastome of is 62.8%. Phylogenetic analyses were performed using the entire plastome, including spacers, introns, etc., and we determined that 32 and were closely related. The complete plastome sequence of will provide a useful resource for the conservation genetics of this species as 34 well as for the phylogenetic studies in Caryophyllales.
猪笼草科是一种直立或攀援的草本植物(高0.5 - 2米),分布于非洲(马达加斯加)、南亚和东南亚、北澳大利亚以及太平洋岛屿(加罗林群岛)。中国只有一个物种。它生长在海拔从海平面到400米的森林、草原、沼泽、山区、路边、荒地等潮湿且多沙的土壤环境中。在中国,它已被列为易危物种。在此,我们报告并描述了[物种名称]的完整质体基因组序列,旨在提供有助于其保护的基因组资源。完整的质体基因组长度为155,755 bp,包含被子植物质体基因组的典型结构和基因内容,包括两个26,415 bp的反向重复(IR)区域、一个84,997 bp的大单拷贝(LSC)区域和一个17,928 bp的小单拷贝(SSC)区域。该质体基因组包含113个基因,由77个独特的蛋白质编码基因、3个假基因、29个独特的tRNA基因和4个独特的rRNA基因组成。[物种名称]质体基因组的总体A/T含量为62.8%。使用包括间隔区、内含子等在内的整个质体基因组进行了系统发育分析,我们确定[物种名称]与32个[其他物种名称]以及[其他物种名称]密切相关。[物种名称]的完整质体基因组序列将为该物种的保护遗传学以及石竹目系统发育研究提供有用资源。