• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

中国福建(野牡丹科)完整叶绿体基因组的重测序与重新组装。

The re-sequencing and re-assembly of complete chloroplast genome of (Melastomataceae) from Fujian, China.

作者信息

Hao Yang, Wen Zhenying, Chen Bin, Han Wenchao, Liu Zhongjian, Peng Donghui

机构信息

College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, China.

Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2219-2220. doi: 10.1080/23802359.2019.1624640.

DOI:10.1080/23802359.2019.1624640
PMID:33365482
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687374/
Abstract

The plant genus of the family Melastomataceae is comprised of nine species and one variety in China. is the only creeping species of this genus. Previous study has reported the complete chloroplast genome of from Guangzhou, China, but there may be some differences between plant populations from different regions. Herein, we reported the complete chloroplast genome of from Fuzhou, China, which was assembled from Pacbio and whole genome data was sequenced. The sequence has a circular molecular length of 156,598 bp and contained 129 genes. Phylogenetic analysis indicated that was closely related to in Melastomataceae. The study aims to provide insights for the future studies on the differences in molecular evolution level between plant populations of and taxonomy of .

摘要

野牡丹科的该植物属在中国由9个物种和1个变种组成。[具体物种名称1]是该属唯一的匍匐物种。先前的研究报道了来自中国广州的[具体物种名称1]的完整叶绿体基因组,但不同地区的植物种群之间可能存在一些差异。在此,我们报道了来自中国福州的[具体物种名称1]的完整叶绿体基因组,其通过Pacbio组装并对全基因组数据进行了测序。该序列的环状分子长度为156,598 bp,包含129个基因。系统发育分析表明,[具体物种名称1]在野牡丹科中与[具体物种名称2]密切相关。该研究旨在为未来关于[具体物种名称1]植物种群分子进化水平差异以及[具体物种名称1]分类学的研究提供见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6ea/7687374/ffbb858273e3/TMDN_A_1624640_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6ea/7687374/ffbb858273e3/TMDN_A_1624640_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6ea/7687374/ffbb858273e3/TMDN_A_1624640_F0001_B.jpg

相似文献

1
The re-sequencing and re-assembly of complete chloroplast genome of (Melastomataceae) from Fujian, China.中国福建(野牡丹科)完整叶绿体基因组的重测序与重新组装。
Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2219-2220. doi: 10.1080/23802359.2019.1624640.
2
Structure and features of the complete chloroplast genome of ..的完整叶绿体基因组的结构与特征
Physiol Mol Biol Plants. 2019 Jul;25(4):1043-1054. doi: 10.1007/s12298-019-00651-x. Epub 2019 Mar 12.
3
The Melastoma dodecandrum genome and the evolution of Myrtales.地稔基因组与桃金娘目植物的进化
J Genet Genomics. 2022 Feb;49(2):120-131. doi: 10.1016/j.jgg.2021.10.004. Epub 2021 Oct 28.
4
The complete chloroplast genome sequence of (Melastomataceae).(野牡丹科)的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2017 Apr 24;2(1):242-243. doi: 10.1080/23802359.2017.1318680.
5
Genome-Wide Identification and Characterization of the GRF Gene Family in .在 中全基因组鉴定和分析 GRF 基因家族
Int J Mol Sci. 2023 Jan 9;24(2):1261. doi: 10.3390/ijms24021261.
6
The specific status of Melastoma kudoi (Melastomataceae, Melastomeae).野牡丹科野牡丹族谷木的分类地位
Bot Stud. 2019 Mar 28;60(1):5. doi: 10.1186/s40529-019-0253-2.
7
Development and characterization of microsatellite markers for Melastoma dodecandrum (Melastomataceae).开发和鉴定野牡丹科直管野牡丹微卫星标记。
Appl Plant Sci. 2013 Feb 27;1(3). doi: 10.3732/apps.1200294. eCollection 2013 Mar.
8
Similar Morphologies but Different Origins: Hybrid Status of Two More Semi-creeping Taxa of .相似的形态但不同的起源:两种半匍匐类群的杂交状态
Front Plant Sci. 2017 Apr 26;8:673. doi: 10.3389/fpls.2017.00673. eCollection 2017.
9
Genome-Wide Identification and Analysis of WRKY Gene Family in .在 中全基因组鉴定和分析 WRKY 基因家族。
Int J Mol Sci. 2023 Oct 5;24(19):14904. doi: 10.3390/ijms241914904.
10
[Determination of gallic acid in Melastoma dodecandrum by RP-HPLC].反相高效液相色谱法测定地稔中没食子酸的含量
Zhongguo Zhong Yao Za Zhi. 2005 Feb;30(3):180-1.

引用本文的文献

1
A Comprehensive Analysis of Auxin Response Factor Gene Family in Genome.对 基因组中的生长素响应因子基因家族进行全面分析。
Int J Mol Sci. 2024 Jan 9;25(2):806. doi: 10.3390/ijms25020806.

本文引用的文献

1
Structure and features of the complete chloroplast genome of ..的完整叶绿体基因组的结构与特征
Physiol Mol Biol Plants. 2019 Jul;25(4):1043-1054. doi: 10.1007/s12298-019-00651-x. Epub 2019 Mar 12.
2
Organelle_PBA, a pipeline for assembling chloroplast and mitochondrial genomes from PacBio DNA sequencing data.细胞器_PBA,一种用于从PacBio DNA测序数据组装叶绿体和线粒体基因组的流程。
BMC Genomics. 2017 Jan 7;18(1):49. doi: 10.1186/s12864-016-3412-9.
3
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.
RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
4
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.
5
Melastomeae come full circle: biogeographic reconstruction and molecular clock dating.野牡丹科植物回归原点:生物地理重建与分子钟定年
Evolution. 2001 Jul;55(7):1315-24. doi: 10.1111/j.0014-3820.2001.tb00654.x.