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中国草药五味子(木兰科:五味子属)叶绿体全基因组的特征与遗传分析

Characterization and genetic analysis of the complete chloroplast genome of (Magnoliaceae: Schisandra), an herbal medicine from China.

作者信息

Tian Zhuo

机构信息

College of Information Technology, Jilin Agricultural University, Changchun, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2428-2430. doi: 10.1080/23802359.2019.1637291.

Abstract

is a deciduous woody vine plant that has been used in traditional medicine for thousands of years in China. In this study, we researched the complete chloroplast genome of The complete chloroplast genome length is 147,779 bp, containing a large single-copy region (LSC) of 97,352bp, a small single-copy region (SSC) of 20,313 bp, and a pair of inverted repeat (IR) regions of 15,057 bp. The overall nucleotide composition is: A of 29.8%, T of 30.8%, C of 20.2%, and G of 19.2%, with a total GC-content of the chloroplast genome 39.4% and AT of 60.6%. Whole chloroplast genome of contains 126 genes, including 83 protein-coding genes (PCG), 35 transfer RNA (tRNAs) genes, and 8 ribosome RNA (rRNAs) genes. Phylogenetic and genetic analysis based on 30 herbal species confirmed the position of closely related to . The complete chloroplast genome of provides more molecular data for the genetic diversity and genetic evolutionary relationship of this species in China.

摘要

是一种落叶木质藤本植物,在中国传统医学中已被使用了数千年。在本研究中,我们对[物种名称]的完整叶绿体基因组进行了研究。完整的叶绿体基因组长度为147,779 bp,包含一个97,352 bp的大单拷贝区域(LSC)、一个20,313 bp的小单拷贝区域(SSC)和一对15,057 bp的反向重复(IR)区域。总体核苷酸组成为:A占29.8%,T占30.8%,C占20.2%,G占19.2%,叶绿体基因组的总GC含量为39.4%,AT含量为60.6%。[物种名称]的完整叶绿体基因组包含126个基因,包括83个蛋白质编码基因(PCG)、35个转运RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。基于30种草本植物的系统发育和遗传分析证实了[物种名称]与[相关物种名称]密切相关的位置。[物种名称]的完整叶绿体基因组为该物种在中国的遗传多样性和遗传进化关系提供了更多的分子数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e663/7687546/2801e4630550/TMDN_A_1637291_F0001_C.jpg

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