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壳斗科(山毛榉科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Fagaceae).

作者信息

Zeng Qin-Meng, Liu Bin, Lin Ru-Qiang, Jiang Yu-Ting, Liu Zhong-Jian, Chen Shi-Pin

机构信息

College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, China.

Camellia Oleifera Research Center at College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2493-2494. doi: 10.1080/23802359.2019.1637299.

Abstract

is classified as the national second-class protective tree species in China and is widely distributed in Middle East Asia. We determined the complete chloroplast genome sequence for using Illumina sequencing data. The complete chloroplast sequence is 160,763 bp, including large single-copy (LSC) region of 90,292 bp, small single-copy (SSC) region of 18,831 bp, and a pair of invert repeats (IR) regions of 25,820 bp. Plastid genome contains 128 genes, 80 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 26 chloroplast genomes indicates that is closely related to in Fagaceae.

摘要

在中国被列为国家二级保护树种,广泛分布于东亚中部。我们利用Illumina测序数据确定了[物种名称]的完整叶绿体基因组序列。完整的叶绿体序列为160,763 bp,包括90,292 bp的大单拷贝(LSC)区域、18,831 bp的小单拷贝(SSC)区域和一对25,820 bp的反向重复(IR)区域。质体基因组包含128个基因,80个蛋白质编码基因,40个tRNA基因和8个rRNA基因。基于26个叶绿体基因组的系统发育分析表明,[物种名称]与壳斗科的[另一物种名称]密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fe0f/7687598/567020d3250b/TMDN_A_1637299_F0001_B.jpg

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