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三明野生香蕉()叶绿体全基因组特征及系统发育关系

Characterization of the complete chloroplast genome of Sanming wild banana () and phylogenetic relationships.

作者信息

Zhang Yong-Yan, Liu Fan, Tian Na, Che Jing-Ru, Sun Xue-Li, Lai Zhong-Xiong, Cheng Chun-Zhen

机构信息

College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 17;4(2):2614-2616. doi: 10.1080/23802359.2019.1642167.

DOI:10.1080/23802359.2019.1642167
PMID:33365650
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7706688/
Abstract

Sanming wild banana () is a cold resistant wild banana found in Fujian province of China. In this study, we characterized its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 171,815 bp in size, containing a pair of IR regions (35,142 bp), a large single copy region (89,995 bp), and a small single copy region (11,464 bp). The whole chloroplast genome contains 111 unique genes, including 78 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis revealed that Sanming wild banana showed the closest relationship with that collected from Yunnan Province of China.

摘要

三明野生蕉()是在中国福建省发现的一种耐寒野生蕉。在本研究中,我们使用BGISEQ - 500测序对其完整叶绿体基因组进行了特征分析。叶绿体基因组大小为171,815 bp,包含一对IR区域(35,142 bp)、一个大单拷贝区域(89,995 bp)和一个小单拷贝区域(11,464 bp)。整个叶绿体基因组包含111个独特基因,包括78个蛋白质编码基因、29个tRNA和4个rRNA。系统发育最大似然分析表明,三明野生蕉与从中国云南省采集的野生蕉关系最为密切。

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