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来自中国的[具体物种名称缺失]线粒体全基因组测序与分析及其系统发育分析。

Sequencing and analysis of the complete mitochondrial genome of from China and its phylogenetic analysis.

作者信息

Zhi-Min Jin, Ke-Song Qin, Bo-Qi Li, Jun-Sheng Zhang, He Cai, Jin-Xun Li, Zhu Wang, Zhu Liu

机构信息

College of Life Science and Technology, Mudanjiang Normal University, Mudanjiang, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2019 Aug 29;4(2):2791-2793. doi: 10.1080/23802359.2019.1659118.

DOI:10.1080/23802359.2019.1659118
PMID:33365730
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7706458/
Abstract

The complete mitogenome sequence of was determined using long PCR. The genome was 16,969 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, 1 origin of L strand replication and 1 control region. The overall base composition of the heavy strand is A (32.5%), C (22.3%), T (31.9%), and G (13.3%). The base compositions present clearly the A-T skew, which is most obviously in the control region and protein-coding genes. Mitochondrial genome analyses based on MP, ML, NJ, and Bayesian analyses yielded identical phylogenetic trees. The five species formed a monophyletic group with the high bootstrap value (100%) in all examinations. This study verifies the evolutionary status of in Soricidae at the molecular level. The mitochondrial genome would be a significant supplement for the genetic background.

摘要

使用长PCR技术测定了[物种名称]的完整线粒体基因组序列。该基因组长度为16,969 bp,包含13个蛋白质编码基因、2个核糖体RNA基因、22个转运RNA基因、1个轻链复制起点和1个控制区。重链的总体碱基组成为A(32.5%)、C(22.3%)、T(31.9%)和G(13.3%)。碱基组成明显呈现A-T偏斜,在控制区和蛋白质编码基因中最为明显。基于最大简约法(MP)、最大似然法(ML)、邻接法(NJ)和贝叶斯分析的线粒体基因组分析产生了相同的系统发育树。在所有检测中,这五个[物种名称]物种形成了一个具有高自展值(100%)的单系群。本研究在分子水平上验证了[物种名称]在鼩鼱科中的进化地位。线粒体基因组将为[物种名称]的遗传背景提供重要补充。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5457/7706458/f58e1f3b98af/TMDN_A_1659118_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5457/7706458/f58e1f3b98af/TMDN_A_1659118_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5457/7706458/f58e1f3b98af/TMDN_A_1659118_F0001_B.jpg

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