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一种半寄生药用植物(桑寄生科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Viscaceae), a semiparasitic medicinal plant.

作者信息

Wei Xueping, Guo Haojie, Che Peng, Zhang Bengang, Liu Haitao, Qi Yaodong

机构信息

Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, China.

Engineering Research Center of Traditional Chinese Medicine Resource, Ministry of Education, Institute of Medicinal Plant Development, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2019 Sep 3;4(2):2904-2905. doi: 10.1080/23802359.2019.1660923.

DOI:10.1080/23802359.2019.1660923
PMID:33365784
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707847/
Abstract

(Viscaceae) is a kind of semiparasitic shrub used as medicinal plant. The complete chloroplast (cp) genome of was sequenced and characterized in this study. Length of total cp genome is 128,744 bp, which is constructed by four typical regions including a large single-copy region (LSC, 73,684 bp), a small single-copy region (SSC, 8630 bp) and a pair of inverted-repeat regions (IRs, 23,215 bp). 100 unique genes are predicted including 68 protein-coding genes, 28 tRNA genes and four rRNA genes. Phylogenetic analysis were performed based on 30 shared genes of 12 species in Santalales using maximum likelihood method. The results showed a close relationship between and . The complete cp genome of would provide valuable genetic resources for further study on phylogeny, population genetics and identification in .

摘要

(檀香科)是一种用作药用植物的半寄生灌木。本研究对其完整叶绿体(cp)基因组进行了测序和特征分析。cp基因组全长128,744 bp,由四个典型区域组成,包括一个大单拷贝区域(LSC,73,684 bp)、一个小单拷贝区域(SSC,8630 bp)和一对反向重复区域(IRs,23,215 bp)。预测有100个独特基因,包括68个蛋白质编码基因、28个tRNA基因和4个rRNA基因。采用最大似然法基于檀香目12个物种的30个共享基因进行了系统发育分析。结果表明与之间关系密切。的完整cp基因组将为进一步研究其系统发育、群体遗传学和鉴定提供有价值的遗传资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d61e/7707847/c06e8cd412f1/TMDN_A_1660923_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d61e/7707847/c06e8cd412f1/TMDN_A_1660923_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d61e/7707847/c06e8cd412f1/TMDN_A_1660923_F0001_B.jpg

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Front Plant Sci. 2017 Jun 30;8:968. doi: 10.3389/fpls.2017.00968. eCollection 2017.
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