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朔玉(Shuo Yu)和登·哈托格(den Hartog)的叶绿体基因组结构及系统发育位置

Chloroplast genome structure and phylogenetic position of Shuo Yu & den Hartog.

作者信息

Yu Shuo, Shi Miao-Miao, Jiang Kai

机构信息

Fourth Institute of Oceanography, Ministry of Natural Resources, Beihai, China.

Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2019 Sep 5;4(2):2916-2917. doi: 10.1080/23802359.2019.1662746.

Abstract

is widely distributed in marine and inland saline habitats in temperate and tropical regions. In this study, the complete chloroplast genome sequence of was successfully obtained using Illumina sequencing. The full length of the chloroplast genome length was 158,897 bp with a typical quadripartite structure: one large single copy (LSC) region (88,952 bp), one small single copy (SSC) region (19,047 bp), and a pair of inverted repeats (IR) (25,449 bp each). The GC content of this genome was 35.9%. The whole genome contained 136 genes, including 88 protein-coding genes, 40 tRNA genes, and eight rRNA genes. Phylogenetic analysis indicated that formed a distinct clade, being separated from and .

摘要

广泛分布于温带和热带地区的海洋和内陆盐碱栖息地。在本研究中,使用Illumina测序成功获得了其完整的叶绿体基因组序列。叶绿体基因组全长158,897 bp,具有典型的四分体结构:一个大单拷贝(LSC)区域(88,952 bp),一个小单拷贝(SSC)区域(19,047 bp),以及一对反向重复序列(IR)(各25,449 bp)。该基因组的GC含量为35.9%。整个基因组包含136个基因,包括88个蛋白质编码基因、40个tRNA基因和8个rRNA基因。系统发育分析表明,它形成了一个独特的分支,与……和……分开。

由于原文部分内容缺失,翻译中部分表述用“……”代替。

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