• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

沉水大型植物(眼子菜科)叶绿体全基因组序列的特征分析及其系统发育位置

Characterization of the complete chloroplast genome sequence of submerged macrophyte (Potamogetonaceae) and its phylogenetic position.

作者信息

Tian Jian-Juan, Zhang Xue, Liu Zhen-Dian, Shen Shi-Kang

机构信息

School of Life Sciences, Yunnan University, Kunming, China.

Breeding Base for State Key Laboratory of Land Degradation and Ecological Restoration in Northwest China, Key Laboratory for Restoration and Reconstruction of Degraded Ecosystem in Northwest China of Ministry of Education, Ningxia University, Yinchuan, China.

出版信息

Mitochondrial DNA B Resour. 2019 Dec 18;5(1):327-328. doi: 10.1080/23802359.2019.1703595.

DOI:10.1080/23802359.2019.1703595
PMID:33366541
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748562/
Abstract

is widely distributed submerged macrophyte in the world. Herein, the complete chloroplast genome of this species was assembled and characterized using whole genome next-generation sequencing. The complete chloroplast genome showed a circular genome of 156,669 bp size with 36.5% GC content. The genome is of typical structure and contain a pair of inverted repeat (IR) regions with 26,074 bp, separated by one large single-copy (LSC) with 86,285 bp, and one small single-copy (SSC) regions with 18,236 bp. assembly and annotation showed the presence of 131 unique genes with 85 protein-coding genes, 38 tRNA genes, and eight rRNA genes. A maximum-likelihood phylogenomic tree reconstructed based on 15 chloroplast genomes reveals that is most closely related to

摘要

是世界上广泛分布的沉水植物。在此,利用全基因组二代测序技术组装并鉴定了该物种的完整叶绿体基因组。完整的叶绿体基因组呈环状,大小为156,669 bp,GC含量为36.5%。该基因组结构典型,包含一对26,074 bp的反向重复(IR)区域,被一个86,285 bp的大单拷贝(LSC)区域和一个18,236 bp的小单拷贝(SSC)区域隔开。组装和注释显示存在131个独特基因,包括85个蛋白质编码基因、38个tRNA基因和8个rRNA基因。基于15个叶绿体基因组重建的最大似然系统发育树表明, 与 关系最为密切。

(注:原文中部分物种名缺失,翻译时保留了原文格式)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/764c/7748562/723970532ec6/TMDN_A_1703595_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/764c/7748562/723970532ec6/TMDN_A_1703595_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/764c/7748562/723970532ec6/TMDN_A_1703595_F0001_B.jpg

相似文献

1
Characterization of the complete chloroplast genome sequence of submerged macrophyte (Potamogetonaceae) and its phylogenetic position.沉水大型植物(眼子菜科)叶绿体全基因组序列的特征分析及其系统发育位置
Mitochondrial DNA B Resour. 2019 Dec 18;5(1):327-328. doi: 10.1080/23802359.2019.1703595.
2
Characterization of the complete chloroplast genome sequence of wetland macrophyte (Typhaceae).湿地大型植物(香蒲科)叶绿体全基因组序列的特征分析
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):136-137. doi: 10.1080/23802359.2019.1698348.
3
The complete chloroplast genome sequence of (Potamogetonaceae).眼子菜科(Potamogetonaceae)植物的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2023 May 12;8(5):546-549. doi: 10.1080/23802359.2023.2209216. eCollection 2023.
4
The complete chloroplast genome sequence of endangered plant (Arecaceae).濒危植物(棕榈科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2021 May 27;6(6):1772-1774. doi: 10.1080/23802359.2021.1932625.
5
Characterization of the complete chloroplast genome of (Hydrocharitaceae), a vulnerable submerged macrophyte in China.中国一种易危沉水大型植物水鳖科(Hydrocharitaceae)完整叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2020 Jan 21;5(1):404-405. doi: 10.1080/23802359.2019.1704197.
6
The complete chloroplast genome of and its phylogenetic analysis.[物种名称]的完整叶绿体基因组及其系统发育分析。 (你提供的原文中“of”后面缺少具体物种名称,这里补充了一个通用表述“[物种名称]”以便使译文更完整)
Mitochondrial DNA B Resour. 2019 Oct 24;4(2):3756-3757. doi: 10.1080/23802359.2019.1681921.
7
The complete chloroplast genome of .……的完整叶绿体基因组
Mitochondrial DNA B Resour. 2019 Dec 27;5(1):360-361. doi: 10.1080/23802359.2019.1704200.
8
The complete chloroplast genome of reveals its phylogenetic relationship in Lauraceae.某植物的完整叶绿体基因组揭示了其在樟科中的系统发育关系。 (注:原文中“of”后面缺少具体内容,这里补充了“某植物”使句子完整以便理解)
Mitochondrial DNA B Resour. 2019 Sep 25;4(2):3246-3247. doi: 10.1080/23802359.2019.1669503.
9
The complete chloroplast genome of a mangrove Sheue, Liu & Yong.一种红树植物的完整叶绿体基因组 薛、刘和雍。 (注:这里的“Sheue, Liu & Yong”如果是特定人名等需结合具体背景准确翻译,这里仅按字面呈现)
Mitochondrial DNA B Resour. 2019 Oct 7;4(2):3414-3415. doi: 10.1080/23802359.2019.1674713.
10
Chloroplast genome structure and phylogenetic position of Shuo Yu & den Hartog.朔玉(Shuo Yu)和登·哈托格(den Hartog)的叶绿体基因组结构及系统发育位置
Mitochondrial DNA B Resour. 2019 Sep 5;4(2):2916-2917. doi: 10.1080/23802359.2019.1662746.

引用本文的文献

1
Comparative Plastid Genome and Phylogenomic Analyses of Species.物种的比较质体基因组和系统基因组分析。
Genes (Basel). 2023 Oct 7;14(10):1914. doi: 10.3390/genes14101914.
2
The complete chloroplast genome sequence of (Potamogetonaceae).眼子菜科(Potamogetonaceae)植物的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2023 May 12;8(5):546-549. doi: 10.1080/23802359.2023.2209216. eCollection 2023.

本文引用的文献

1
MISA-web: a web server for microsatellite prediction.MISA-web:一个用于微卫星预测的网络服务器。
Bioinformatics. 2017 Aug 15;33(16):2583-2585. doi: 10.1093/bioinformatics/btx198.
2
Allopatric divergence of Stuckenia filiformis (Potamogetonaceae) on the Qinghai-Tibet Plateau and its comparative phylogeography with S. pectinata in China.青藏高原丝状茨藻(眼子菜科)的异域分化及其与中国龙须眼子菜的比较系统地理学研究
Sci Rep. 2016 Feb 11;6:20883. doi: 10.1038/srep20883.
3
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.
用于检测tRNA和snoRNA的tRNAscan-SE、snoscan和snoGPS网络服务器。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366.
4
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.