Diao Songfeng, Zhang Guoyun, He Caiyun, Duan Aiguo, Zhang Jianguo
State Key Laboratory of Tree Genetics and Breeding & Key Laboratory of Tree Breeding and Cultivation, National Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Non-timber Forestry Research and Development Center, Chinese Academy of Forestry, Key Laboratory of Non-timber Forest Germplasm Enhancement & Utilization of National Forestry and Grassland Administration, Zhengzhou, China.
Mitochondrial DNA B Resour. 2020 Feb 3;5(1):982-983. doi: 10.1080/23802359.2020.1719932.
The complete chloroplast genome sequence of subsp. was characterized from Illumina pair-end sequencing. The chloroplast genome of subsp. was 156,355 bp in length, containing a large single-copy region (LSC) of 84,002 bp, a small single-copy region (SSC) of 19,055 bp, and two inverted repeat (IR) regions of 26,649 bp. The overall GC content is 36.6%, while the corresponding values of the LSC, SSC, and IR regions are 64.5%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 88 protein-coding genes, 38 tRNA genes (29 tRNA species), and 8 rRNA genes (4 rRNA species). The neighbour-joining phylogenetic analysis showed that subsp. and clustered together as sisters to other species.
通过Illumina双末端测序对亚种的完整叶绿体基因组序列进行了表征。亚种的叶绿体基因组长度为156,355 bp,包含一个84,002 bp的大单拷贝区域(LSC)、一个19,055 bp的小单拷贝区域(SSC)和两个26,649 bp的反向重复(IR)区域。总体GC含量为36.6%,而LSC、SSC和IR区域的相应值分别为64.5%、69.2%和60.1%。该基因组包含131个完整基因,包括88个蛋白质编码基因、38个tRNA基因(29种tRNA)和8个rRNA基因(4种rRNA)。邻接法系统发育分析表明,亚种和聚在一起,作为其他物种的姐妹分支。