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:首个红厚壳科植物质体基因组的完整叶绿体基因组

Complete chloroplast genome of : the first Calophyllaceae plastome.

作者信息

Wang Yi, Yuan Xiaolong, Li Yunqing, Zhang Jinfeng

机构信息

Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2019 Sep 17;4(2):3027-3028. doi: 10.1080/23802359.2019.1666668.

DOI:10.1080/23802359.2019.1666668
PMID:33365840
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7706546/
Abstract

The first complete chloroplast genome sequences of were reported in this study. The cpDNA of is 161,470 bp in length, contains a large single copy region (LSC) of 88,760 bp and a small single copy region (SSC) of 17,482 bp, which were separated by a pair of inverted repeat (IR) regions of 27,614 bp. The genome contains 131 genes, including 86 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.4%. Phylogenetic analysis of 30 chloroplast genomes within the order Malpighiales suggests that is closely related to .

摘要

本研究报道了首个完整的叶绿体基因组序列。[物种名称]的叶绿体DNA(cpDNA)长度为161,470 bp,包含一个88,760 bp的大单拷贝区域(LSC)和一个17,482 bp的小单拷贝区域(SSC),它们被一对27,614 bp的反向重复(IR)区域隔开。该基因组包含131个基因,包括86个蛋白质编码基因、8个核糖体RNA基因和37个转移RNA基因。整个基因组的总体GC含量为36.4%。对金虎尾目30个叶绿体基因组的系统发育分析表明,[物种名称]与[另一物种名称]密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc67/7706546/cf64a9e7699a/TMDN_A_1666668_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc67/7706546/cf64a9e7699a/TMDN_A_1666668_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc67/7706546/cf64a9e7699a/TMDN_A_1666668_F0001_B.jpg

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