Wang Yi, Zhao Chuan, Li Yunqing
Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming, People's Republic of China.
Mitochondrial DNA B Resour. 2019 Nov 12;4(2):3959-3960. doi: 10.1080/23802359.2019.1688712.
The first complete chloroplast genome (cpDNA) sequence of was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 153,581 bp in length, contains a large single-copy region (LSC) of 84,940 bp and a small single-copy region (SSC) of 18,741 bp, which were separated by a pair of inverted repeats (IR) regions of 24,950 bp. The genome contains 132 genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 38.3%, and the corresponding values of the LSC, SSC, and IR regions are 36.5, 32.5, and 43.3%, respectively. Further, phylogenomic analysis showed that clustered in a unique clade in order Apiales.
在本研究中，通过Illumina HiSeq双端测序数据确定了首个完整的叶绿体基因组（cpDNA）序列。该cpDNA长度为153,581 bp，包含一个84,940 bp的大单拷贝区域（LSC）和一个18,741 bp的小单拷贝区域（SSC），它们被一对24,950 bp的反向重复（IR）区域隔开。该基因组包含132个基因，包括87个蛋白质编码基因、8个核糖体RNA基因和37个转移RNA基因。全基因组的总体GC含量为38.3%，LSC、SSC和IR区域的相应值分别为36.5%、32.5%和43.3%。此外，系统发育基因组分析表明，[物种名称]在伞形目一个独特的分支中聚类。
