.的完整叶绿体基因组序列
The complete chloroplast genome sequence of .
作者信息
Zhang Xiaoyan, Liu Shuyu, Tian Yang, Li Yi, Zhang Jianguo, Wang Zhaoshan
机构信息
State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Collaborative Innovation Center of Sustainable, Forestry in Southern China, Nanjing Forestry University, Nanjing, China.
出版信息
Mitochondrial DNA B Resour. 2019 Sep 24;4(2):3232-3233. doi: 10.1080/23802359.2019.1668731.
In this study, the complete chloroplast genome sequence of was featured from Illumina pair-end sequencing. In , its length was 156,223 bp, consisting of a large single copy (LSC) region of 84,233 bp, two inverted repeat (IR) copies 27,649 bp and a small single copy (SSC) region of 16,693 bp. The entire GC contents were 37%, and in the LSC, SSC, and IR regions were 35, 31, and 42%, respectively. has 130 unique genes, including 86 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The chloroplast genomes of 12 species of Salicaceae and 1 species of Euphorbiaceae were used to construct the maximum-likelihood phylogenetic tree. It indicated that belongs to Salicaceae and is clustered with as sisters.
在本研究中，通过Illumina双端测序获得了[物种名称]的完整叶绿体基因组序列。在[具体情况]中，其长度为156,223 bp，由一个84,233 bp的大单拷贝（LSC）区域、两个27,649 bp的反向重复（IR）拷贝和一个16,693 bp的小单拷贝（SSC）区域组成。整个基因组的GC含量为37%，在LSC、SSC和IR区域分别为35%、31%和42%。[物种名称]有130个独特基因，包括86个蛋白质编码基因、36个tRNA基因和8个rRNA基因。利用杨柳科12个物种和大戟科1个物种的叶绿体基因组构建了最大似然系统发育树。结果表明，[物种名称]属于杨柳科，与[另一物种名称]聚为姐妹群。
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