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(杨柳科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Salicaceae).

作者信息

Li Ang, Hou Zhe

机构信息

Key Laboratory of Southwest China Wildlife Resources Conservation (Ministry of Education), China West Normal University, Nanchong, China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 8;4(2):3921-3922. doi: 10.1080/23802359.2019.1688121.

Abstract

The complete chloroplast genome sequence of was characterized from Illumina pair-end sequencing. The chloroplast genome of was 155,816 bp in length, containing a large single-copy region (LSC) of 85,804 bp, a small single-copy region (SSC) of 16,489 bp, and two inverted repeat (IR) regions of 26,962 bp. The overall GC content is 36.71%, while the correponding values of the LSC, SSC, and IR regions are 64.9%, 69.2%, and 60.3%, respectively. The genome contains 167 complete genes, including 86 protein-coding genes (77 protein-coding gene species), 73 tRNA genes (29 tRNA species) and 8 rRNA genes(4 rRNA species). The Neighbour-joining phylogenetic analysis showed that and clustered together as sisters to other species.

摘要

通过Illumina双端测序对[物种名称]的完整叶绿体基因组序列进行了表征。[物种名称]的叶绿体基因组长度为155,816 bp,包含一个85,804 bp的大单拷贝区域(LSC)、一个16,489 bp的小单拷贝区域(SSC)和两个26,962 bp的反向重复(IR)区域。总体GC含量为36.71%,而LSC、SSC和IR区域的相应值分别为64.9%、69.2%和60.3%。该基因组包含167个完整基因,包括86个蛋白质编码基因(77种蛋白质编码基因)、73个tRNA基因(29种tRNA)和8个rRNA基因(4种rRNA)。邻接法系统发育分析表明,[物种名称]和[另一物种名称]聚集在一起,作为其他[物种类别]物种的姐妹分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fb7/7707770/c5ac9cca8398/TMDN_A_1688121_F0001_C.jpg

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