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龙胆科(Gentianaceae)植物[具体植物名称未给出]的完整叶绿体基因组:龙胆科外柱花族(Exaceae)的首个质体基因组。

Complete chloroplast genome of (Gentianaceae): the first plastome of the tribe Exaceae in the family Gentianaceae.

作者信息

Wang Jiuli, Cao Qian, He Chuncao, Ma Yulan, Li Yinglin, Liu Jinxia, Zhang Faqi

机构信息

Key Laboratory of Biotechnology and Analysis and Test in Qinghai-Tibet Plateau, College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China.

Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3529-3530. doi: 10.1080/23802359.2019.1676672.

DOI:10.1080/23802359.2019.1676672
PMID:33366071
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707271/
Abstract

Balf.f. ex Regel is a traditional medicinal plant in Yemen and also a popular potted plant. In this study, we sequenced the complete chloroplast genome of on the Illumina HiSeq Platform. The plastome sequence is 153,311 bp in length with a typical quadripartite structure, containing a pair of inverted repeated (IR) regions of 26,079 bp that are separated by a large single copy (LSC) region of 83,724 bp, and a small single copy (SSC) region of 17,509 bp. The GC content of the whole cp genome was 43.14%. A total of 132 functional genes were annotated, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The complete plastome sequence of will provide genetic and genomic information to promote its horticulture, officinal utilisation and systematics research of Gentianaceae (especially the tribe Exaceae).

摘要

巴尔夫.f. 前 Regel 是也门的一种传统药用植物,也是一种受欢迎的盆栽植物。在本研究中,我们在Illumina HiSeq平台上对其完整叶绿体基因组进行了测序。质体基因组序列长度为153,311 bp,具有典型的四分体结构,包含一对26,079 bp的反向重复(IR)区域,由一个83,724 bp的大单拷贝(LSC)区域和一个17,509 bp的小单拷贝(SSC)区域隔开。整个叶绿体基因组的GC含量为43.14%。共注释了132个功能基因,包括87个蛋白质编码基因、37个tRNA基因和8个rRNA基因。该植物的完整质体基因组序列将为促进其园艺、药用利用以及龙胆科(特别是Exaceae族)的系统学研究提供遗传和基因组信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e4eb/7707271/c49f03a0a388/TMDN_A_1676672_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e4eb/7707271/c49f03a0a388/TMDN_A_1676672_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e4eb/7707271/c49f03a0a388/TMDN_A_1676672_F0001_B.jpg

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
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